RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 OR1J2Q8NGS2 313 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 OR10AC1Q8NH08 325 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 TSEN15Q8WW01 171 aaKnown RBP13.15□□□□□ -0.3
COL4A5-203ENST00000470339 TMEM106AQ96A25 262 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 KCNS3Q9BQ31 491 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
COL4A5-203ENST00000470339 SLITRK2Q9H156 845 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 ZNF275Q9NSD4 429 aaPredicted RBP13.15□□□□□ -0.3
COL4A5-203ENST00000470339 SNTG1Q9NSN8 517 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 ZNF319Q9P2F9 582 aa13.15□□□□□ -0.3
COL4A5-203ENST00000470339 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.3
COL4A5-203ENST00000470339 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 DHRS7CA6NNS2 312 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 EEF1E1-BLOC1S5C9J1V9 151 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 J3QW42 95 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 CCL21O00585 134 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 PDCD5O14737 125 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
COL4A5-203ENST00000470339 ICMTO60725 284 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 TMEM127O75204 238 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
COL4A5-203ENST00000470339 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 LCATP04180 440 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
COL4A5-203ENST00000470339 TSC22D1Q15714 1073 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 FAM27D1Q5T7N8 215 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 RELL2Q8NC24 303 aaPredicted RBP13.14□□□□□ -0.31
COL4A5-203ENST00000470339 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 SLC30A7Q8NEW0 376 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 NXF2Q9GZY0 626 aaKnown RBP13.14□□□□□ -0.31
COL4A5-203ENST00000470339 MMP27Q9H306 513 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 FOXJ3Q9UPW0 622 aa13.14□□□□□ -0.31
COL4A5-203ENST00000470339 A0A1B0GUH1 482 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 C5orf49A4QMS7 147 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 XRCC2O43543 280 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 CLPXO76031 633 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 FSTP19883 344 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SOX2P48431 317 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 PSMD7P51665 324 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 HGFACQ04756 655 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 LSAMPQ13449 338 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SLC25A35Q3KQZ1 300 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 MTFR2Q6P444 385 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 PARP16Q8N5Y8 322 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SGK3Q96BR1 496 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 ZCCHC4Q9H5U6 513 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 TCF7L1Q9HCS4 588 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 TBCCD1Q9NVR7 557 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 N6AMT1Q9Y5N5 214 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 SLC25A15Q9Y619 301 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 KALRNO60229 2985 aa13.13□□□□□ -0.31
COL4A5-203ENST00000470339 A0A075B6Q4 140 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 TBX1O43435 398 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 DHRS3O75911 302 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 RAB3BP20337 219 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 CHRNB4P30926 498 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 MAGEB1P43366 347 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 MXD1Q05195 221 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 SNAI3Q3KNW1 292 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 ZNF404Q494X3 552 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 SERPINA12Q8IW75 414 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 AP3S1Q92572 193 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 MUCL1Q96DR8 90 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 BARHL1Q9BZE3 327 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 OPA3Q9H6K4 179 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 PMF1-BGLAPU3KQ54 211 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 V9GYS6 101 aa13.12□□□□□ -0.31
COL4A5-203ENST00000470339 HEATR1Q9H583 2144 aaKnown RBP13.12□□□□□ -0.31
COL4A5-203ENST00000470339 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
COL4A5-203ENST00000470339 MEGF11A6BM72 1044 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 C16orf97H3BN30 126 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 IGFBP3P17936 291 aaPredicted RBP13.11□□□□□ -0.31
COL4A5-203ENST00000470339 TUBG1P23258 451 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 MALLQ13021 153 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 HNRNPA0Q13151 305 aaKnown RBP13.11□□□□□ -0.31
COL4A5-203ENST00000470339 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
COL4A5-203ENST00000470339 FBXL19-AS1Q494R0 122 aa13.11□□□□□ -0.31
COL4A5-203ENST00000470339 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms