RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TP53I11O14683 189 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 PMS2P2O95744 297 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 BPNT1O95861 308 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 OR3A4PP47883 348 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-205ENST00000469687 TMEM81Q6P7N7 255 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 TMUB2Q71RG4 321 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 DTX1Q86Y01 620 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 ZNF101Q8IZC7 436 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 ANGPTL6Q8NI99 470 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-205ENST00000469687 IMMP1LQ96LU5 166 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 JSRP1Q96MG2 331 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-205ENST00000469687 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
CBWD3-205ENST00000469687 UCN2Q96RP3 112 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 UQCC2Q9BRT2 126 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 ZNF416Q9BWM5 594 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 C1QTNF6Q9BXI9 259 aa12.97□□□□□ -0.33
CBWD3-205ENST00000469687 GPN3Q9UHW5 284 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-205ENST00000469687 ZDBF2Q9HCK1 2354 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 S100A11P31949 105 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 EIF1P41567 113 aaKnown RBP12.96□□□□□ -0.33
CBWD3-205ENST00000469687 IL11RAQ14626 422 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 SGCAQ16586 387 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 FAM209AQ5JX71 171 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 CDH26Q8IXH8 852 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
CBWD3-205ENST00000469687 EDEM2Q9BV94 578 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
CBWD3-205ENST00000469687 TRAV14DV4A0A0A6YYC5 116 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 OR6C65A6NJZ3 312 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 POM121CA8CG34 1229 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 HMSDA8MTL9 139 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 TMEM14DPA8MWL7 114 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 CCSO14618 274 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 SSX5O60225 188 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 PPP3CBP16298 524 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 ADH6P28332 368 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 HRH1P35367 487 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 CXADRP78310 365 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 SLC35A1P78382 337 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 H3F3AP84243 136 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 CLPPQ16740 277 aaPredicted RBP12.96□□□□□ -0.34
CBWD3-205ENST00000469687 RNASE10Q5GAN6 216 aaKnown RBP12.96□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF468Q5VIY5 522 aaPredicted RBP12.96□□□□□ -0.34
CBWD3-205ENST00000469687 RAET1LQ5VY80 246 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 RAB12Q6IQ22 244 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 ALKAL2Q6UX46 152 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF283Q8N7M2 679 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 STEAP2Q8NFT2 490 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 CCDC107Q8WV48 283 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.34
CBWD3-205ENST00000469687 BANF2Q9H503 90 aa12.96□□□□□ -0.34
CBWD3-205ENST00000469687 SCO1O75880 301 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 CRYZL1O95825 349 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 WDPCPO95876 746 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 KLK3P07288 261 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-205ENST00000469687 RRASP10301 218 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 TDGF1P13385 188 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 RAB14P61106 215 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF239Q16600 458 aaKnown RBP12.95□□□□□ -0.34
CBWD3-205ENST00000469687 AANATQ16613 207 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-205ENST00000469687 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 KCNN3Q9UGI6 736 aa12.95□□□□□ -0.34
CBWD3-205ENST00000469687 IGKV1-9A0A0C4DH69 117 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 ZIC3O60481 467 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 MPIG6BO95866 241 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 HLA-AP01891 365 aaKnown RBP12.94□□□□□ -0.34
CBWD3-205ENST00000469687 PDGFAP04085 211 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 CD96P40200 585 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 AP2S1P53680 142 aaPredicted RBP12.94□□□□□ -0.34
CBWD3-205ENST00000469687 MPPED2Q15777 294 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 PLAC9Q5JTB6 97 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 LIN54Q6MZP7 749 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 RFPL4BQ6ZWI9 263 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 LRRC18Q8N456 261 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 OR10R2Q8NGX6 335 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 WBP1Q96G27 269 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF700Q9H0M5 742 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 NXT1Q9UKK6 140 aaKnown RBP12.94□□□□□ -0.34
CBWD3-205ENST00000469687 MRPS28Q9Y2Q9 187 aaKnown RBP12.94□□□□□ -0.34
CBWD3-205ENST00000469687 CCDC163A0A0D9SF12 145 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 DISC1C4P0D8 188 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 NTN3O00634 580 aaPredicted RBP12.94□□□□□ -0.34
CBWD3-205ENST00000469687 SOCS1O15524 211 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 LIFP15018 202 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 C4BPBP20851 252 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 KCNMB1Q16558 191 aa12.94□□□□□ -0.34
CBWD3-205ENST00000469687 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms