RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ACOT13Q9NPJ3 140 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PTTG3PQ9NZH4 202 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 KCNN3Q9UGI6 736 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF391Q9UJN7 358 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 FREM1Q5H8C1 2179 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 ALPK2Q86TB3 2170 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 GGT3PA6NGU5 568 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 PRR32B1ATL7 298 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 C19orf84I3L1E1 186 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SMPD2O60906 423 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OCM2P0CE71 109 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OCMP0CE72 109 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SELEP16581 610 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF12P17014 697 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 CELP19835 753 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 TUBG1P23258 451 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 UCP2P55851 309 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 EMX1Q04741 257 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SPOCK1Q08629 439 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 IRF3Q14653 427 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 CDK5R1Q15078 307 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 ARMCX4Q5H9R4 360 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 WDR38Q5JTN6 314 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SPATA46Q5T0L3 261 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 NCMAPQ5T1S8 102 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 TMEM244Q5VVB8 128 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SP5Q6BEB4 398 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 RFPL4BQ6ZWI9 263 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 PGAP1Q75T13 922 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 CATSPERDQ86XM0 798 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 FTMTQ8N4E7 242 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 ZFP41Q8N8Y5 198 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OR8B12Q8NGG6 310 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OR2G2Q8NGZ5 317 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 THRSPQ92748 146 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SMIM19Q96E16 107 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 REEP6Q96HR9 211 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 FAM71F1Q96KD3 344 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 OR5M11Q96RB7 305 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SIGLEC11Q96RL6 698 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 MGLLQ99685 303 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 C1QTNF5Q9BXJ0 243 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 ISYNA1Q9NPH2 558 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 TUBG2Q9NRH3 451 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 FAIMQ9NVQ4 179 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 TBCCD1Q9NVR7 557 aa7.02□□□□□ -1.29
HDAC6-216ENST00000468949 NUFIP1Q9UHK0 495 aaKnown RBP7.02□□□□□ -1.29
HDAC6-216ENST00000468949 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 A0A0U1RQV5 110 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 LOC107986453A0A1B0GWG9 222 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 A0A1W2PPW3 197 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 DPRXA6NFQ7 191 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 A6NNC1 897 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 H3BSA7 217 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 CCRL2O00421 344 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 SYT7O43581 403 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TIMM8AO60220 97 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 GPRIN2O60269 458 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 SERPINA3P01011 423 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 CD2P06729 351 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ADRA2AP08913 450 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF35P13682 527 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF20P17024 532 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 IGFBP2P18065 325 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ACHEP22303 614 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 PSMA1P25786 263 aaKnown RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 MAPK3P27361 379 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 SSTR2P30874 369 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 CALCRP30988 508 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 WNT5AP41221 380 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 CCR9P51686 369 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 GTF2A1P52655 376 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ACSM1Q08AH1 577 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TRAM1Q15629 374 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TSTQ16762 297 aaKnown RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 SNAI3Q3KNW1 292 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 KRTAP27-1Q3LI81 207 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF718Q3SXZ3 478 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TIMM50Q3ZCQ8 353 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 GLYATL3Q5SZD4 288 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF684Q5T5D7 378 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 UBE2UQ5VVX9 321 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 LIPKQ5VXJ0 399 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 C22orf34Q6ZV56 151 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 DOK3Q7L591 496 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 GPR141Q7Z602 305 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TMEM200AQ86VY9 491 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF101Q8IZC7 436 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 PAQR4Q8N4S7 273 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ACBD4Q8NC06 268 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 CCDC54Q8NEL0 328 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 NUP37Q8NFH4 326 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 KBTBD8Q8NFY9 601 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 OR13C3Q8NGS6 347 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 OR51E1Q8TCB6 317 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF75AQ96N20 296 aa7.01□□□□□ -1.29
HDAC6-216ENST00000468949 TMED9Q9BVK6 235 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms