RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CX3CR1P49238 355 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 CDNFQ49AH0 187 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 TRAPPC6BQ86SZ2 158 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 OR5AS1Q8N127 324 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF416Q9BWM5 594 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 AUP1Q9Y679 476 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 METTL21EPA6NDL7 271 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 MELTFP08582 738 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 POU3F2P20265 443 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 H3F3AP84243 136 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 IKZF1Q13422 519 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 SGCAQ16586 387 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF239Q16600 458 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 RSPO4Q2I0M5 234 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 RAET1LQ5VY80 246 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 FAM57BQ71RH2 274 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 DTX1Q86Y01 620 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF584Q8IVC4 421 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 MAML2Q8IZL2 1156 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 GTPBP8Q8N3Z3 284 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 AGBL5Q8NDL9 886 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 MRGPRFQ96AM1 343 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 ZBTB8AQ96BR9 441 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF700Q9H0M5 742 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 NXT1Q9UKK6 140 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-210ENST00000464987 FXYD6-FXYD2A0A087WZ82 144 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 A0A1W2PP11 408 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZIC3O60481 467 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF20P17024 532 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 SLC35A1P78382 337 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZFP36L1Q07352 338 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 TOR2AQ5JU69 321 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 C11orf88Q6PI97 169 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 TMEM104Q8NE00 496 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 TMPRSS13Q9BYE2 586 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 SELENOIQ9C0D9 397 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 FXYD6Q9H0Q3 95 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 SLCO5A1Q9H2Y9 848 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF160Q9HCG1 818 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF230Q9UIE0 474 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 VSIG4Q9Y279 399 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 A0A0A6YYD4 124 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 OR14I1A6ND48 311 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 BPNT1O95861 308 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 OR3A4PP47883 348 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 SEC61A1P61619 476 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 CLLU1Q5K131 121 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 LY6G6FQ5SQ64 297 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF283Q8N7M2 679 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 UQCC2Q9BRT2 126 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 ALX4Q9H161 411 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 GLTPQ9NZD2 209 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 MAB21L2Q9Y586 359 aa16.5■□□□□ 0.23
TSPAN4-210ENST00000464987 WDPCPO95876 746 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 LIFP15018 202 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 TRIM61Q5EBN2 209 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 OPN5Q6U736 354 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF101Q8IZC7 436 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 ANGPTL4Q9BY76 406 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 TMEM14DPA8MWL7 114 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 PMS2P2O95744 297 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 RPS18P62269 152 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 GLIPR1L1Q6UWM5 242 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 CDH26Q8IXH8 852 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 LRRC18Q8N456 261 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 ZNF775Q96BV0 537 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 C1orf147Q96MC9 270 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 SLC25A21Q9BQT8 299 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 EDEM2Q9BV94 578 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 BANF2Q9H503 90 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 MOB1AQ9H8S9 216 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 UPB1Q9UBR1 384 aa16.49■□□□□ 0.23
TSPAN4-210ENST00000464987 H3BUI4 141 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 SSX5O60225 188 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 CYC1P08574 325 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 SSR4P51571 173 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 SORDQ00796 357 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 HLXQ14774 488 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 KCNMB1Q16558 191 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 RAB12Q6IQ22 244 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 C3P1Q6ZMU1 363 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 COMMD7Q86VX2 200 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 C12orf45Q8N5I9 185 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 LIN37Q96GY3 246 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 LPAR5Q9H1C0 372 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 KCNK7Q9Y2U2 307 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 DOCK10Q96BY6 2186 aa16.48■□□□□ 0.23
TSPAN4-210ENST00000464987 IGKV1-9A0A0C4DH69 117 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 LOC102725191A0A1B0GVB3 256 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 CD63P08962 238 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 HRH1P35367 487 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 CXADRP78310 365 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 MC2RQ01718 297 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 DHRS2Q13268 280 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 EXT1Q16394 746 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 LPAL2Q16609 132 aa16.47■□□□□ 0.23
TSPAN4-210ENST00000464987 HDDC2Q7Z4H3 204 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms