RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.33
NCL-207ENST00000461347 CNTD2Q9H8S5 307 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 SLC5A6Q9Y289 635 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CCDC85CA6NKD9 419 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 SHISA8B8ZZ34 492 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
NCL-207ENST00000461347 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCL-207ENST00000461347 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
NCL-207ENST00000461347 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 NICN1Q9BSH3 213 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 TANC1Q9C0D5 1861 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 NME2P1O60361 137 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 LRP3O75074 770 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CTSBP07858 339 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 OR1D5P58170 312 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 PHLDA2Q53GA4 152 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 TMEM128Q5BJH2 165 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 FHL5Q5TD97 284 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CLEC1AQ8NC01 280 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 RHOFQ9HBH0 211 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CHST11Q9NPF2 352 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 FRG2CA6NGY1 282 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 J3QRE1 110 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 OR2A4O95047 310 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 GPR3P46089 330 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 CX3CR1P49238 355 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 CSNK1EP49674 416 aaKnown RBP12.96□□□□□ -0.34
NCL-207ENST00000461347 LINC01590Q5TEZ4 76 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 C11orf40Q8WZ69 217 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 EDAQ92838 391 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 OR2A7Q96R45 310 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 NPAS1Q99742 590 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 ZCCHC4Q9H5U6 513 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 KLF15Q9UIH9 416 aa12.96□□□□□ -0.34
NCL-207ENST00000461347 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.34
NCL-207ENST00000461347 MDC1Q14676 2089 aaKnown RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 TMEM218A2RU14 115 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 OGFOD3Q6PK18 319 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 GDF15Q99988 308 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 RASL12Q9NYN1 266 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 MRPS17Q9Y2R5 130 aaKnown RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 SDK2Q58EX2 2172 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 SPTY2D1-AS1A0A0U1RR47 76 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 BET1O15155 118 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 TO15178 435 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 DIRAS3O95661 229 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 PPIAP62937 165 aaKnown RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 CLINT1Q14677 625 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 LILRB1Q8NHL6 650 aaPredicted RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 SPTSSAQ969W0 71 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 RARRES3Q9UL19 164 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 CA14Q9ULX7 337 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 H0YIG0 161 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 K7EQS6 105 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 SIGLEC6O43699 453 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 CD1AP06126 327 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 KLK3P07288 261 aaPredicted RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 TUBG1P23258 451 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 FCGR2CP31995 323 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 ACY1Q03154 408 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 INPP5JQ15735 1006 aaPredicted RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
NCL-207ENST00000461347 GLRX5Q86SX6 157 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 ST7LQ8TDW4 575 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 PCDHGA1Q9Y5H4 931 aa12.95□□□□□ -0.34
NCL-207ENST00000461347 ABCD3P28288 659 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 CDAP32320 146 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 OPRM1P35372 400 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 PRSS35Q8N3Z0 413 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 ZDHHC22Q8N966 263 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 OR1S1Q8NH92 325 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 FBXO7Q9Y3I1 522 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 C9J4A7 227 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 PRSS44E7EML9 344 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 G3V3Y1 287 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 BPNT1O95861 308 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 IFNA17P01571 189 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
NCL-207ENST00000461347 SKP2Q13309 424 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 SHISA5Q8N114 240 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 SUMF1Q8NBK3 374 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 OR4D6Q8NGJ1 314 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 WNT2BQ93097 391 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 MRPS18BQ9Y676 258 aaKnown RBP12.94□□□□□ -0.34
NCL-207ENST00000461347 IGHV5-51A0A0C4DH38 117 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
NCL-207ENST00000461347 PNPP00491 289 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 SMIM10L1P0DMW3 83 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 OR13C7P0DN81 318 aa12.94□□□□□ -0.34
NCL-207ENST00000461347 RPL12P30050 165 aaKnown RBP12.94□□□□□ -0.34
NCL-207ENST00000461347 OR2B8PP59922 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms