RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 OR4K15Q8NH41 348 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 OR10C1Q96KK4 312 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 SPACA7Q96KW9 195 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 ELF4Q99607 663 aaPredicted RBP13.83□□□□□ -0.2
SSR4-206ENST00000460616 PRR13Q9NZ81 148 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 NUP210LQ5VU65 1888 aa13.83□□□□□ -0.2
SSR4-206ENST00000460616 SLC34A2O95436 690 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 SFT2D2O95562 160 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 CST4P01036 141 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 IFNA17P01571 189 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 PET100P0DJ07 73 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 NME1P15531 152 aaKnown RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 GNB3P16520 340 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 TBPP20226 339 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 KCTD18Q6PI47 426 aaPredicted RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 ATG4DQ86TL0 474 aaPredicted RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 CATSPERDQ86XM0 798 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 GATSQ8NAP1 163 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 DTWD2Q8NBA8 298 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 OPA3Q9H6K4 179 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 TRBV23OR9-2A0A075B6M9 112 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 HRKO00198 91 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 TSPAN15O95858 294 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 RIDAP52758 137 aaKnown RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 S100A10P60903 97 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 ROM1Q03395 351 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 EGR4Q05215 589 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 SQSTM1Q13501 440 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 FIGLAQ6QHK4 219 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 NPSR1Q6W5P4 371 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 Q6ZS52 159 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 RERGQ96A58 199 aaPredicted RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 KTI12Q96EK9 354 aaPredicted RBP13.82□□□□□ -0.2
SSR4-206ENST00000460616 C2orf50Q96LR7 162 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 VSTM2LQ96N03 204 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 MAP3K3Q99759 626 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 ADAM19Q9H013 955 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 RAB33BQ9H082 229 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 Q9N2J8 555 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 UFSP2Q9NUQ7 469 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 HHLA2Q9UM44 414 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 STARD10Q9Y365 291 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 FLVCR1Q9Y5Y0 555 aa13.82□□□□□ -0.2
SSR4-206ENST00000460616 LOC390937A0A1W2PQ73 354 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 H0YGG7 62 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 XKRYO14609 159 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 FOXS1O43638 330 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 NPY4RP50391 375 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 CCR4P51679 360 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 ARF3P61204 181 aaPredicted RBP13.81□□□□□ -0.2
SSR4-206ENST00000460616 CCINQ13939 588 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 CA13Q8N1Q1 262 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 LYPD6BQ8NI32 183 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 CCNL2Q96S94 520 aaPredicted RBP13.81□□□□□ -0.2
SSR4-206ENST00000460616 SLC26A1Q9H2B4 701 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 TBC1D29Q9UFV1 150 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 GPR132Q9UNW8 380 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 USP34Q70CQ2 3546 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 ST8SIA5O15466 376 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 YIF1AO95070 293 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 EML2O95834 649 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 COL9A1P20849 921 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 SULT1A1P50225 295 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 PPP1R3BQ86XI6 285 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 TMEM230Q96A57 120 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 FOXQ1Q9C009 403 aa13.81□□□□□ -0.2
SSR4-206ENST00000460616 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
SSR4-206ENST00000460616 CACNA1CQ13936 2221 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 DOCK9Q9BZ29 2069 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 C2orf74A8MZ97 194 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 GPR37O15354 613 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 TNFSF14O43557 240 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
SSR4-206ENST00000460616 IFNA2P01563 188 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 HOXB5P09067 269 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 HKR1P10072 659 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 HOXA5P20719 270 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 ANKRD55Q3KP44 614 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 PYY3Q5JQD4 70 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 AGBL4Q5VU57 503 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 TMEM268Q5VZI3 342 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 GKN2Q86XP6 184 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 FOXRED2Q8IWF2 684 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 ZNF440Q8IYI8 595 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 ZNF615Q8N8J6 731 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 FLVCR1-AS1Q8TAF5 88 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 EIF5A2Q9GZV4 153 aaKnown RBP13.8□□□□□ -0.2
SSR4-206ENST00000460616 LMAN1LQ9HAT1 526 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 LRP12Q9Y561 859 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 TRPM6Q9BX84 2022 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 LMX1BO60663 402 aa13.8□□□□□ -0.2
SSR4-206ENST00000460616 HOXC4P09017 264 aaPredicted RBP13.8□□□□□ -0.2
SSR4-206ENST00000460616 PI3P19957 117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms