RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 PMF1-BGLAPU3KQ54 211 aa8.44□□□□□ -1.06
RFC4-210ENST00000449502 SHISA3A0PJX4 238 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 ANKRD61A6NGH8 418 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 IFITM5A6NNB3 132 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 E9PLN8 166 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 AIPO00170 330 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 CTDSP2O14595 271 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 DHRS3O75911 302 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 CGAP01215 116 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 EPXP11678 715 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 CBR1P16152 277 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 FSTP19883 344 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 COX5AP20674 150 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 CCL1P22362 96 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 BDKRB2P30411 391 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 THBS4P35443 961 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 MAP2K3P46734 347 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 IDH3GP51553 393 aaPredicted RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 RIPPLY1Q0D2K3 151 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 TSC22D1Q15714 1073 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 RAB11BQ15907 218 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 SNAI3Q3KNW1 292 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 KRTAP27-1Q3LI81 207 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 GLYATL3Q5SZD4 288 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 HES5Q5TA89 166 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 PRSS45Q7RTY3 260 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 MRPL21Q7Z2W9 205 aaKnown RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 LRRTM1Q86UE6 522 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 JAGN1Q8N5M9 183 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 PARP16Q8N5Y8 322 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 NAXEQ8NCW5 288 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 STEAP2Q8NFT2 490 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 OR14K1Q8NGZ2 314 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 TRMT10AQ8TBZ6 339 aaKnown RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 BORCS5Q969J3 196 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 APOBEC3DQ96AK3 386 aaPredicted RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 SGK3Q96BR1 496 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 C10orf35Q96D05 121 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 ORAI1Q96D31 301 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 MUCL1Q96DR8 90 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
RFC4-210ENST00000449502 VKORC1Q9BQB6 163 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 C1QTNF5Q9BXJ0 243 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 ZCCHC4Q9H5U6 513 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 ABCB9Q9NP78 766 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 TMEM138Q9NPI0 162 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 ZNF224Q9NZL3 707 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 PIGLQ9Y2B2 252 aa8.43□□□□□ -1.06
RFC4-210ENST00000449502 EML6Q6ZMW3 1958 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 URB1O60287 2271 aaKnown RBP8.42□□□□□ -1.06
RFC4-210ENST00000449502 TRAV8-7A0A075B6U6 113 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 A0A0G2JNJ9 132 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 A0A1B0GTI1 187 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 LOC390937A0A1W2PQ73 354 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 A0A1W2PR80 420 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 FABP12A6NFH5 140 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 GGT3PA6NGU5 568 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 HCKP08631 526 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 SLC2A2P11168 524 aaPredicted RBP8.42□□□□□ -1.06
RFC4-210ENST00000449502 CCL2P13500 99 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 TNFSF8P32971 234 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 CAPZA1P52907 286 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 SPOCK1Q08629 439 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 RSPO1Q2MKA7 263 aaPredicted RBP8.42□□□□□ -1.06
RFC4-210ENST00000449502 SLC25A35Q3KQZ1 300 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 FAM131AQ6UXB0 335 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 MRGPRGQ86SM5 289 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 OR1M1Q8NGA1 313 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 PP6455Q8WZ26 134 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
RFC4-210ENST00000449502 CPNE2Q96FN4 548 aaPredicted RBP8.42□□□□□ -1.06
RFC4-210ENST00000449502 WBP1Q96G27 269 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 POM121L2Q96KW2 1035 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 OPA3Q9H6K4 179 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 B3GNT2Q9NY97 397 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 ELOVL5Q9NYP7 299 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 ZNF319Q9P2F9 582 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 Q9UFV3 132 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 STEAP1Q9UHE8 339 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 OSGIN2Q9Y236 505 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
RFC4-210ENST00000449502 NCKAP5O14513 1909 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 LOC100509620A0A075B734 347 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 A0A0G2JK05 382 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 A6NIN4 97 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 OR5H1A6NKK0 313 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 DHRS7CA6NNS2 312 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 A8MXE2 369 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 CCL21O00585 134 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 SULT1B1O43704 296 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 LMX1BO60663 402 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 HPGDSO60760 199 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 CALCBP10092 127 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 BMP4P12644 408 aa8.41□□□□□ -1.06
RFC4-210ENST00000449502 SNRPBP14678 240 aaKnown RBP8.41□□□□□ -1.06
RFC4-210ENST00000449502 IGFBP3P17936 291 aaPredicted RBP8.41□□□□□ -1.06
RFC4-210ENST00000449502 ATF1P18846 271 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms