RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 C6orf15Q6UXA7 325 aaPredicted RBP12.92□□□□□ -0.34
RFTN1-203ENST00000432519 BEST3Q8N1M1 668 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF283Q8N7M2 679 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 P4HTMQ9NXG6 502 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 DNAJC13O75165 2243 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 IGKV1-9A0A0C4DH69 117 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 NPIPA2E9PIF3 369 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 NPIPA3F8WFD2 350 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 TPPPO94811 219 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 WIPI1Q5MNZ9 446 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 ACER2Q5QJU3 275 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 SPINK14Q6IE38 97 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 GGNQ86UU5 652 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 ANGPTL5Q86XS5 388 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 OR5D14Q8NGL3 314 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 NUDCD2Q8WVJ2 157 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 ROBO4Q8WZ75 1007 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 RANBP3Q9H6Z4 567 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 M0R296 226 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 PRAF2O60831 178 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 LPLP06858 475 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 OR3A4PP47883 348 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 MECP2P51608 486 aaKnown RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 RAC1P63000 192 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 OR52W1Q6IF63 320 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 C17orf107Q6ZR85 190 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 GPR137Q96N19 417 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 SLX1AQ9BQ83 275 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 SPRY4Q9C004 299 aa12.91□□□□□ -0.34
RFTN1-203ENST00000432519 FOXD3Q9UJU5 478 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
RFTN1-203ENST00000432519 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 ANKRD34BA5PLL1 514 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 GNB3P16520 340 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 RAB3AP20336 220 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF93P35789 620 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 H2BFSP57053 126 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF260Q3ZCT1 412 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 MUC20Q8N307 709 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 MEIOBQ8N635 442 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 FBXO17Q96EF6 278 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 PCNX2A6NKB5 2137 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 MPC2O95563 127 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF735P0CB33 412 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 AWAT2Q6E213 333 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 SLC22A24Q8N4F4 322 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 OR5D18Q8NGL1 313 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
RFTN1-203ENST00000432519 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 HES7Q9BYE0 225 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 TAS2R8Q9NYW2 309 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 R4GN57 208 aa12.9□□□□□ -0.34
RFTN1-203ENST00000432519 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 DHHO43323 396 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 RAB3DO95716 219 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 P04436 131 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CD59P13987 128 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 ZNF20P17024 532 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 MSR1P21757 451 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 S100A1P23297 94 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
RFTN1-203ENST00000432519 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CHST4Q8NCG5 386 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 OR8H1Q8NGG4 311 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 AQP3Q92482 292 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 SGCZQ96LD1 299 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 SLC6A7Q99884 636 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 BANF2Q9H503 90 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 LOC100509620A0A075B734 347 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CXCL13O43927 109 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 EIF1BO60739 113 aaKnown RBP12.89□□□□□ -0.35
RFTN1-203ENST00000432519 TRAPPC6AO75865 159 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 JMJD7P0C870 316 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 LIPCP11150 499 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 FAUP35544 74 aaKnown RBP12.89□□□□□ -0.35
RFTN1-203ENST00000432519 SLC6A9P48067 706 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 ZNF81P51508 661 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CHAF1BQ13112 559 aa12.89□□□□□ -0.35
RFTN1-203ENST00000432519 CDNFQ49AH0 187 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms