RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 BOLLQ8N9W6 283 aaKnown RBP14.26□□□□□ -0.13
TRIM39-209ENST00000428728 OR8D4Q8NGM9 314 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 OR2T4Q8NH00 348 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 SGMS2Q8NHU3 365 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 ZNRF4Q8WWF5 429 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 UPRTQ96BW1 309 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 NUDT16L1Q9BRJ7 211 aaKnown RBP14.26□□□□□ -0.13
TRIM39-209ENST00000428728 MMADHCQ9H3L0 296 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-209ENST00000428728 ZMAT3Q9HA38 289 aaKnown RBP14.26□□□□□ -0.13
TRIM39-209ENST00000428728 TBC1D23Q9NUY8 699 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 CLN8Q9UBY8 286 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 COMMD3-BMI1R4GMX3 469 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 MDFIC2A0A1B0GVS7 189 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 C5orf63A6NC05 138 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 GGT3PA6NGU5 568 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 CD300LBA8K4G0 201 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 TNFRSF11BO00300 401 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 SPARCP09486 303 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF92Q03936 586 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 PPP1R8Q12972 351 aaKnown RBP14.25□□□□□ -0.13
TRIM39-209ENST00000428728 GLYATL3Q5SZD4 288 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 DCDC5Q6ZRR9 648 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 DCXRQ7Z4W1 244 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 LNX2Q8N448 690 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 CELF2-AS1Q8N7Q2 184 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 Q8TCH9 128 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 DACT3Q96B18 629 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-209ENST00000428728 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 N6AMT1Q9Y5N5 214 aa14.25□□□□□ -0.13
TRIM39-209ENST00000428728 PHYHO14832 338 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 KRT36O76013 467 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 SOX14O95416 240 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 PLATP00750 562 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 GYPBP06028 91 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 SLC2A1P11166 492 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 CPT2P23786 658 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 MTNR1AP48039 350 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 GYS2P54840 703 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 GNGT1P63211 74 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 CRMP1Q14194 572 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 WDR25Q64LD2 544 aaPredicted RBP14.24□□□□□ -0.13
TRIM39-209ENST00000428728 SFRP4Q6FHJ7 346 aaPredicted RBP14.24□□□□□ -0.13
TRIM39-209ENST00000428728 BRD3OSQ6XYD6 125 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 SLC37A3Q8NCC5 494 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 TAF15Q92804 592 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRIM39-209ENST00000428728 ERGIC1Q969X5 290 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 SLC25A28Q96A46 364 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 TECTBQ96PL2 329 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 FN3KRPQ9HA64 309 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 NDE1Q9NXR1 346 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 ARL2BPQ9Y2Y0 163 aa14.24□□□□□ -0.13
TRIM39-209ENST00000428728 NOP16Q9Y3C1 178 aaKnown RBP14.24□□□□□ -0.13
TRIM39-209ENST00000428728 C22orf46C9J442 243 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 C3orf80F5H4A9 247 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 DCTN3O75935 186 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 CCNB2O95067 398 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 FSTL3O95633 263 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 RNASE1P07998 156 aaKnown RBP14.23□□□□□ -0.13
TRIM39-209ENST00000428728 PPIAL4GP0DN37 164 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 OTX1P32242 354 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-209ENST00000428728 PRKXP51817 358 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 FGF12P61328 243 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 TAF13Q15543 124 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 DRAM2Q6UX65 266 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 SPATC1Q76KD6 591 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 AQP11Q8NBQ7 271 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 OR56B2PQ8NGI1 322 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 OR4C15Q8NGM1 316 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 OR6K6Q8NGW6 343 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 DDOQ99489 341 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 TSSK6Q9BXA6 273 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 SLC22A4Q9H015 551 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 CENPMQ9NSP4 180 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 ARMC1Q9NVT9 282 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 VNN3Q9NY84 501 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 IL20Q9NYY1 176 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 RNF7Q9UBF6 113 aa14.23□□□□□ -0.13
TRIM39-209ENST00000428728 KIR2DS1A0A191URI9 304 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 A6NLC8 198 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 TMPRSS2O15393 492 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ATP8B1O43520 1251 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ENSAO43768 121 aaKnown RBP14.22□□□□□ -0.13
TRIM39-209ENST00000428728 GASTP01350 101 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 CLUP10909 449 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 FMO3P31513 532 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ENTPD1P49961 510 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 HMGA2P52926 109 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 SLC9A3R2Q15599 337 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 OR8B8Q15620 311 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF362Q5T0B9 420 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF770Q6IQ21 691 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF841Q6ZN19 808 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 RASSF6Q6ZTQ3 369 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 LINC00471Q8N535 108 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF511Q8NB15 262 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 OR4Q3Q8NH05 313 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 SLAMF6Q96DU3 332 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 ZNF747Q9BV97 191 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 UNKLQ9H9P5 680 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms