RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CCL1P22362 96 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 ARL6IP1Q15041 203 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 AVPI1Q5T686 147 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 TMEM92Q6UXU6 159 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 SLC29A4Q7RTT9 530 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 C9orf40Q8IXQ3 194 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 GVQW1Q8N7I0 195 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 OR1N1Q8NGS0 311 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 PAQR8Q8TEZ7 354 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 NUDCD2Q8WVJ2 157 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 NRIP2Q9BQI9 281 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 PBOV1Q9GZY1 135 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 TLNRD1Q9H1K6 362 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CUTCQ9NTM9 273 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 NPIPA1Q9UND3 350 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 A0A1W2PNV4 684 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 ZNF217O75362 1048 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CD5P06127 495 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 GLULP15104 373 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 HIST1H1DP16402 221 aaKnown RBP13.53□□□□□ -0.24
C9orf3-204ENST00000424143 AKR1C4P17516 323 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 ALDH3B1P43353 468 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 EMP2P54851 167 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 FOXK1P85037 733 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 ZP2Q05996 745 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 C9orf50Q5SZB4 431 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 RTL6Q6ICC9 239 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 UNQ6126/PRO20091Q6UXV3 157 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 TMPRSS9Q7Z410 1059 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 FAM89BQ8N5H3 189 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 COMMD1Q8N668 190 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 OR56B1Q8NGI3 324 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 MARCH1Q8TCQ1 289 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CASTOR1Q8WTX7 329 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 TMEM230Q96A57 120 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 RRNAD1Q96FB5 475 aaKnown RBP13.53□□□□□ -0.24
C9orf3-204ENST00000424143 SELENOIQ9C0D9 397 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 SLC5A7Q9GZV3 580 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 CHST11Q9NPF2 352 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 B3GALT5Q9Y2C3 310 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 MEMO1Q9Y316 297 aa13.53□□□□□ -0.24
C9orf3-204ENST00000424143 FREM3P0C091 2139 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 SOX1O00570 391 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-204ENST00000424143 MPZL1O95297 269 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 NUDT14O95848 222 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 CSN2P05814 226 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 SULT1A2P50226 295 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 HSD11B2P80365 405 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 RNF212Q495C1 297 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 OR52W1Q6IF63 320 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 POC1AQ8NBT0 407 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 LYPD6BQ8NI32 183 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 SLAMF6Q96DU3 332 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 ADAT3Q96EY9 351 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-204ENST00000424143 C1orf147Q96MC9 270 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-204ENST00000424143 GAS2L1Q99501 681 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-204ENST00000424143 LRRC61Q9BV99 259 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 PARP11Q9NR21 331 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 MMP17Q9ULZ9 603 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 OSGIN2Q9Y236 505 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 CACNA1CQ13936 2221 aa13.52□□□□□ -0.25
C9orf3-204ENST00000424143 MFNGO00587 321 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 GNB3P16520 340 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF93P35789 620 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF84P51523 738 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 ARHGDIBP52566 201 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 TAS2R46P59540 309 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 HSF1Q00613 529 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 KCNMB1Q16558 191 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 ANGPTL5Q86XS5 388 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 PRR22Q8IZ63 422 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 PLPP5Q8NEB5 264 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 OR10H5Q8NGA6 315 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 RNF138Q8WVD3 245 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
C9orf3-204ENST00000424143 CMBLQ96DG6 245 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-204ENST00000424143 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
C9orf3-204ENST00000424143 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 RHOFQ9HBH0 211 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 SLC22A11Q9NSA0 550 aa13.51□□□□□ -0.25
C9orf3-204ENST00000424143 FBXO9Q9UK97 447 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-204ENST00000424143 C13orf42A0A1B0GVH6 325 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 TCRBV21S2A2A0A5A6 115 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 B4DGG1 531 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SIGLEC5O15389 551 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms