RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZMAT5Q9UDW3 170 aaKnown RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 DUSP13Q9UII6 198 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 FGF17O60258 216 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 TIMP1P01033 207 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 CA3P07451 260 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 USF1P22415 310 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 PAX6P26367 422 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 CHRNB4P30926 498 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 PCBP3P57721 371 aaKnown RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 TAS2R45P59539 299 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 COTL1Q14019 142 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 DUSP23Q9BVJ7 150 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 SLC6A13Q9NSD5 602 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 HSPB2A8KAH6 182 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 OR7C2O60412 319 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 PMCHP20382 165 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 NOVA1P51513 510 aaKnown RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 HSPB2Q16082 182 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 ZNF574Q6ZN55 896 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 ST6GAL2Q96JF0 529 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 S1PR5Q9H228 398 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 CD63P08962 238 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 ATF1P18846 271 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 SMUG1Q53HV7 270 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 LAIR1Q6GTX8 287 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 CYHR1Q6ZMK1 362 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 CXorf58Q96LI9 332 aa11.2□□□□□ -0.62
CLCN4-203ENST00000421085 ARID1BQ8NFD5 2236 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-203ENST00000421085 KCNJ3P48549 501 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 EMDP50402 254 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 PPP1CBP62140 327 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 SSX1Q16384 188 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 C17orf99Q6UX52 265 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 NHLRC1Q6VVB1 395 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 GPR32P1Q8NGA4 272 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 IGHV3-20A0A0C4DH32 117 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 CST7O76096 145 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 CT45A10P0DMU9 189 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 ICAM2P13598 275 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 CD46P15529 392 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 BSGP35613 385 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 ASCL1P50553 236 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 DHODHQ02127 395 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 TBC1D28Q2M2D7 210 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 RDH5Q92781 318 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 LIN7CQ9NUP9 197 aaKnown RBP11.19□□□□□ -0.62
CLCN4-203ENST00000421085 CST4P01036 141 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 PCMT1P22061 227 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 FGF9P31371 208 aaPredicted RBP11.19□□□□□ -0.62
CLCN4-203ENST00000421085 THEM4Q5T1C6 240 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 DTWD2Q8NBA8 298 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 OR52N5Q8NH56 324 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 LANCL2Q9NS86 450 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 H3BP45 60 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 UPK1AO00322 258 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 MBTPS2O43462 519 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 SUB1P53999 127 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLCN4-203ENST00000421085 LPAL2Q16609 132 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 PRR27Q6MZM9 219 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 CORO2AQ92828 525 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 RICTORQ6R327 1708 aa11.19□□□□□ -0.62
CLCN4-203ENST00000421085 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
CLCN4-203ENST00000421085 RAC1P63000 192 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 C12orf49Q9H741 205 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 MBNL1Q9NR56 388 aaKnown RBP11.18□□□□□ -0.62
CLCN4-203ENST00000421085 A0A1W2PNV4 684 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 XKRY2A2RUG3 117 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 SIRPB1O00241 398 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 NRASP01111 189 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 EN2P19622 333 aaPredicted RBP11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ETFDHQ16134 617 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 PDFQ9HBH1 243 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ADGRL4Q9HBW9 690 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 CYB5R1Q9UHQ9 305 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 KCND3Q9UK17 655 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 A4GNTQ9UNA3 340 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 M0R135 149 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 TMEM127O75204 238 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 CD1CP29017 333 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 DRAM2Q6UX65 266 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ZNF799Q96GE5 643 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 RTL8AQ9BWD3 113 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 C4orf47A7E2U8 309 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ANKRD10Q9NXR5 420 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 SLC17A2O00624 439 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 SEMG1P04279 462 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 OR5G3P0C626 314 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ZNF17P17021 662 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 GALR1P47211 349 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 ERVFC1-1P60608 527 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 CDC20BQ86Y33 519 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms