RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SYNGR4O95473 234 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 CST2P09228 141 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 B4GALT1P15291 398 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 PPIAP62937 165 aaKnown RBP18.18■□□□□ 0.5
USP39-203ENST00000409470 CEACAM16Q2WEN9 425 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 PCGF3Q3KNV8 242 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 TMEM255AQ5JRV8 349 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 ZNF799Q96GE5 643 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 MOV10Q9HCE1 1003 aaKnown RBP18.18■□□□□ 0.5
USP39-203ENST00000409470 FAM86C1Q9NVL1 165 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 NKIRAS2Q9NYR9 191 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 MTFP1Q9UDX5 166 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 NOSIPQ9Y314 301 aaKnown RBP18.18■□□□□ 0.5
USP39-203ENST00000409470 C5orf63A6NC05 138 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 SGCEO43556 437 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 DBHP09172 617 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 ZNF708P17019 499 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 ZNF93P35789 620 aaPredicted RBP18.18■□□□□ 0.5
USP39-203ENST00000409470 ARG2P78540 354 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 GUCA2AQ02747 115 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 RIPPLY2Q5TAB7 128 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 OLFML2AQ68BL7 652 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 PTX4Q96A99 478 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 FOXB1Q99853 325 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 ACTR6Q9GZN1 396 aa18.18■□□□□ 0.5
USP39-203ENST00000409470 ALDOBP05062 364 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 SDHBP21912 280 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 PMPCAQ10713 525 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 RAB35Q15286 201 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 RSPO1Q2MKA7 263 aaPredicted RBP18.17■□□□□ 0.5
USP39-203ENST00000409470 OR14K1Q8NGZ2 314 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 OR56B4Q8NH76 319 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 ITFG2Q969R8 447 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 TMEM45BQ96B21 275 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 SCMH1Q96GD3 660 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 C20orf85Q9H1P6 137 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 GPR35Q9HC97 309 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 TAS2R8Q9NYW2 309 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 RAB22AQ9UL26 194 aa18.17■□□□□ 0.5
USP39-203ENST00000409470 MCTS1Q9ULC4 181 aaKnown RBP18.17■□□□□ 0.5
USP39-203ENST00000409470 A0A0U1RQV5 110 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 CDK2AP1O14519 115 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 MRPL33O75394 65 aaKnown RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 ITGB2P05107 769 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 RAB6AP20340 208 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 OTX1P32242 354 aaPredicted RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 SCRN3Q0VDG4 424 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 AWAT2Q6E213 333 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 FAAP20Q6NZ36 180 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PLXDC2Q6UX71 529 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 DACT3Q96B18 629 aaPredicted RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 LYZL4Q96KX0 146 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PRRG4Q9BZD6 226 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 TP63Q9H3D4 680 aaPredicted RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 ASCL3Q9NQ33 180 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PAQR5Q9NXK6 330 aaPredicted RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 ING3Q9NXR8 418 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 IGKV3D-15A0A087WSY6 115 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 A0A0A6YYH2 397 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 C7orf66A4D0T2 115 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 METTL21EPA6NDL7 271 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 MEIS3P1A6NDR6 274 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 A6NJ64 397 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 BPNT1O95861 308 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 HCKP08631 526 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 CSF1P09603 554 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PSMB1P20618 241 aaKnown RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 FAUP35544 74 aaKnown RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 RAG2P55895 527 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 SPACA5Q96QH8 159 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 MED28Q9H204 178 aa18.16■□□□□ 0.5
USP39-203ENST00000409470 PAIP2BQ9ULR5 123 aaKnown RBP18.16■□□□□ 0.5
USP39-203ENST00000409470 NKX2-8O15522 239 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 IGHV3-9P01782 118 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 LIPCP11150 499 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 HYAL4Q2M3T9 481 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ZNF774Q6NX45 483 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ANGPTL5Q86XS5 388 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 OR5AS1Q8N127 324 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 PRSS33Q8NF86 280 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ZNF486Q96H40 463 aaPredicted RBP18.15■□□□□ 0.5
USP39-203ENST00000409470 GHITMQ9H3K2 345 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 EMC3Q9P0I2 261 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 IGLV3-1P01715 115 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 PATE4P0C8F1 98 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ZNF32P17041 273 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ECH1Q13011 328 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 SRSF6Q13247 344 aaKnown RBP18.15■□□□□ 0.5
USP39-203ENST00000409470 SLC10A1Q14973 349 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 GSG1Q2KHT4 349 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ZNF766Q5HY98 468 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 SLC16A14Q7RTX9 510 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 ACBD4Q8NC06 268 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 OR1F12Q8NHA8 337 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 GIMAP1Q8WWP7 306 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 FAM46BQ96A09 425 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 OR10A2Q9H208 303 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 SLCO5A1Q9H2Y9 848 aa18.15■□□□□ 0.5
USP39-203ENST00000409470 SYNGR3O43761 229 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms