RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 LDLRAD4O15165 306 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ARPC5O15511 151 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 AQP8O94778 261 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SIX6O95475 246 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RAB3DO95716 219 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 PMS2P2O95744 297 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CALCRP30988 508 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 PCK2Q16822 640 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C2orf68Q2NKX9 166 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C4orf46Q504U0 113 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C1orf100Q5SVJ3 147 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ABHD17BQ5VST6 288 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DEGS2Q6QHC5 323 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZNF627Q7L945 461 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MDGA2Q7Z553 956 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 NKAIN3Q8N8D7 197 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR8S1Q8NH09 359 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SPACA9Q96E40 222 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZNF552Q9H707 407 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR52A1Q9UKL2 312 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 EMC9Q9Y3B6 208 aa14.13□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LOC400499M0QZD8 3231 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CPAMD8Q8IZJ3 1885 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LOC107986453A0A1B0GWG9 222 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LOC390937A0A1W2PQ73 354 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 NPIPA5E9PKD4 350 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 H3BUI4 141 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DOK2O60496 412 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SUMO3P55854 103 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TMEM244Q5VVB8 128 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FDCSPQ8NFU4 85 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MFSD8Q8NHS3 518 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SCARB1Q8WTV0 552 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DVL3Q92997 716 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FOXRED1Q96CU9 486 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 POFUT1Q9H488 388 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 G6PC2Q9NQR9 355 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 NPIPA1Q9UND3 350 aa14.12□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ANKRD11Q6UB99 2663 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FXYD6-FXYD2A0A087WZ82 144 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TMEM82A0PJX8 343 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MPZL1O95297 269 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 UBCP0CG48 685 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RAB6AP20340 208 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 BAMBIQ13145 260 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C11orf88Q6PI97 169 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 H1FNTQ75WM6 255 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 GPAT4Q86UL3 456 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 BEST3Q8N1M1 668 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TMEM156Q8N614 296 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ST7LQ8TDW4 575 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FXYD6Q9H0Q3 95 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CGGBP1Q9UFW8 167 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MS4A18H0YCH9 400 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CD74P04233 296 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ACSM4P0C7M7 580 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 HLA-DOBP13765 273 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FBXW4P57775 412 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 PMPCAQ10713 525 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MS4A18Q3C1V0 323 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DCAF12L2Q5VW00 463 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TMEM65Q6PI78 240 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DCXRQ7Z4W1 244 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 JAGN1Q8N5M9 183 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 WBP1Q96G27 269 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ARL6Q9H0F7 186 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ABI3Q9P2A4 366 aa14.11□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MFSD2BA6NFX1 497 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CYB5AP00167 134 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RPA2P15927 270 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OC90Q02509 493 aaPredicted RBP14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C17orf67Q0P5P2 114 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MFAP5Q13361 173 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZNF468Q5VIY5 522 aaPredicted RBP14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RAB12Q6IQ22 244 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 GSG1LQ6UXU4 331 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR51A2Q8NGJ7 313 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CCDC120Q96HB5 630 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 KCNK17Q96T54 332 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CHST6Q9GZX3 395 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SDHAF2Q9NX18 166 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SPEF1Q9Y4P9 236 aa14.1□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TMEM269A0A1B0GVZ9 245 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZNF736B4DX44 427 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZNF208O43345 1280 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 AMY2AP04746 511 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 NMBP08949 121 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR4E1P0C645 316 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 IL11P20809 199 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 ZP3P21754 424 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CYB561P49447 251 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 UBE2MP61081 183 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SPOCK1Q08629 439 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 GK2Q14410 553 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MEF2DQ14814 521 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR7A5Q15622 319 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SFRP5Q5T4F7 317 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms