RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 EEF1B2P24534 225 aaKnown RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 SLC9A3P48764 834 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 IDH3AP50213 366 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 GZMMP51124 257 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 SLC35A2P78381 396 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 HOXA4Q00056 320 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 ST3GAL3Q11203 375 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 GK2Q14410 553 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 OR8B8Q15620 311 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 KCNMB1Q16558 191 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 RSPO1Q2MKA7 263 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 MESTQ5EB52 335 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 BEND6Q5SZJ8 279 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-203ENST00000397378 FAM122BQ7Z309 247 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 OAFQ86UD1 273 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 NDUFA11Q86Y39 141 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 GLB1L2Q8IW92 636 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 LY6G5BQ8NDX9 201 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 GJC3Q8NFK1 279 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 OR4C13Q8NGP0 309 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 OR10A6Q8NH74 314 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 Q96M85 177 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 EBF4Q9BQW3 602 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 SLC22A4Q9H015 551 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 SEMA6AQ9H2E6 1030 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 WDR76Q9H967 626 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 ADAM18Q9Y3Q7 739 aa7.7□□□□□ -1.18
NEDD9-203ENST00000397378 CSMD3Q7Z407 3707 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 NPFFO15130 113 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 KHDRBS3O75525 346 aaKnown RBP7.69□□□□□ -1.18
NEDD9-203ENST00000397378 GYPAP02724 150 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 CD28P10747 220 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 LMO1P25800 156 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 OR1E2P47887 323 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 PRKCDQ05655 676 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 OR8G1Q15617 311 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 KRTAP27-1Q3LI81 207 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 PGM2L1Q6PCE3 622 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 CALHM3Q86XJ0 350 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 FAM90A1Q86YD7 464 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 NRMQ8IXM6 262 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 MICU2Q8IYU8 434 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 CMTM4Q8IZR5 234 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 DTX3Q8N9I9 347 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 CLPTM1LQ96KA5 538 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 PRRC1Q96M27 445 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 C7orf26Q96N11 449 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 ZNF570Q96NI8 536 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 LYSTQ99698 3801 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-203ENST00000397378 RABEP2Q9H5N1 569 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 RANBP3Q9H6Z4 567 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-203ENST00000397378 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 A4GNTQ9UNA3 340 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-203ENST00000397378 NDUFAF1Q9Y375 327 aa7.69□□□□□ -1.18
NEDD9-203ENST00000397378 EFCAB9A8MZ26 197 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 DYNC1I1O14576 645 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 GMDSO60547 372 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SLC16A7O60669 478 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 PAHP00439 452 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 LHBP01229 141 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 IFNA14P01570 189 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 ACSM4P0C7M7 580 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 CA6P23280 308 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SDHAP31040 664 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 IFNA8P32881 189 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SAA4P35542 130 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 PRSS12P56730 875 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 ACSM1Q08AH1 577 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 MALLQ13021 153 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 TEX36Q5VZQ5 186 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 OTPQ5XKR4 325 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 PGAP1Q75T13 922 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 GCSAMQ8N6F7 178 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 BOLLQ8N9W6 283 aaKnown RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 BEND2Q8NDZ0 799 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 Q8NFD4 153 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 OR13C2Q8NGS9 318 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 PPP1R35Q8TAP8 253 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 TSPEARQ8WU66 669 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SPRYD4Q8WW59 207 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 ST8SIA4Q92187 359 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 DPF1Q92782 380 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 TNFRSF14Q92956 283 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SYT4Q9H2B2 425 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 SIRT7Q9NRC8 400 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 NKIRAS1Q9NYS0 192 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 VSX1Q9NZR4 365 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-203ENST00000397378 ONECUT1Q9UBC0 465 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 POLR1DQ9Y2S0 133 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 MAB21L2Q9Y586 359 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 LHFPL6Q9Y693 200 aa7.68□□□□□ -1.18
NEDD9-203ENST00000397378 CD300LBA8K4G0 201 aa7.67□□□□□ -1.18
NEDD9-203ENST00000397378 ADARB2-AS1A8MUL3 147 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms