RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SOX2P48431 317 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 RPS11P62280 158 aaKnown RBP eCLIP12.18□□□□□ -0.46
GAPDH-203ENST00000396858 LSM3P62310 102 aaKnown RBP12.18□□□□□ -0.46
GAPDH-203ENST00000396858 NAAAQ02083 359 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 GPR50Q13585 617 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 LINC01560Q8TB33 94 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 FAM71F1Q96KD3 344 aaPredicted RBP12.18□□□□□ -0.46
GAPDH-203ENST00000396858 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 KCNS3Q9BQ31 491 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 GPR84Q9NQS5 396 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 PTTG3PQ9NZH4 202 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 ZNF281Q9Y2X9 895 aa12.18□□□□□ -0.46
GAPDH-203ENST00000396858 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 ATP6V1G2-DDX39BF2Z307 99 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 AIREO43918 545 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 LMX1BO60663 402 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 NGFP01138 241 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 CD53P19397 219 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 PSMA1P25786 263 aaKnown RBP12.17□□□□□ -0.46
GAPDH-203ENST00000396858 CRYBB2P43320 205 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 SPATA46Q5T0L3 261 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 FAM27D1Q5T7N8 215 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
GAPDH-203ENST00000396858 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 ANKRD13BQ86YJ7 626 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 OR52H1Q8NGJ2 320 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 APOBEC3DQ96AK3 386 aaPredicted RBP12.17□□□□□ -0.46
GAPDH-203ENST00000396858 ISOC1Q96CN7 298 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 RNF167Q9H6Y7 350 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
GAPDH-203ENST00000396858 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
GAPDH-203ENST00000396858 TRBV5-5A0A0J9YX44 114 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 A0A0U1RQV5 110 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 A0A1B0GTI1 187 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 hCG_38984A0A1B0GV85 526 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 A6NHS1 94 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 C19orf84I3L1E1 186 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 XRCC2O43543 280 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 SYT7O43581 403 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 IGLV3-1P01715 115 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 HLA-DPB1P04440 258 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 EPXP11678 715 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 ZNF35P13682 527 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 CCL1P22362 96 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 CD40P25942 277 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 NCS1P62166 190 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 TRAM1Q15629 374 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 TIMM50Q3ZCQ8 353 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 TMEM244Q5VVB8 128 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 C22orf42Q6IC83 251 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 CD200R1LQ6Q8B3 271 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 TMEM91Q6ZNR0 172 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 ORAI1Q96D31 301 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 CENPOQ9BU64 300 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 SP140LQ9H930 580 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 HHLA2Q9UM44 414 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 ANKHD1Q8IWZ3 2542 aaKnown RBP12.16□□□□□ -0.46
GAPDH-203ENST00000396858 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
GAPDH-203ENST00000396858 TUBAL3A6NHL2 446 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 H3BMQ9 156 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ICMTO60725 284 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ATE1O95260 518 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ISG15P05161 165 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 OCM2P0CE71 109 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 PAX7P23759 505 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 VBP1P61758 197 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 PPP1CBP62140 327 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ZNF92Q03936 586 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 SNTB2Q13425 540 aaKnown RBP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 HLXQ14774 488 aaPredicted RBP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 CTF1Q16619 201 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 Q499Y3 187 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ACSM3Q53FZ2 586 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 DOK3Q7L591 496 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 SSX8Q7RTT4 187 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 MS4A15Q8N5U1 240 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 RAB2BQ8WUD1 216 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 SGK3Q96BR1 496 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 DERL3Q96Q80 235 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 TBCCD1Q9NVR7 557 aa12.15□□□□□ -0.46
GAPDH-203ENST00000396858 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 EIF3KQ9UBQ5 218 aaKnown RBP12.15□□□□□ -0.46
GAPDH-203ENST00000396858 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms