RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 NCF4Q15080 339 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 LGALSLQ3ZCW2 172 aaPredicted RBP0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 USH1GQ495M9 461 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 ZNF678Q5SXM1 525 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 C9orf135Q5VTT2 229 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 GPR107Q5VW38 600 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 TMED8Q6PL24 325 aaPredicted RBP0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 FA2HQ7L5A8 372 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 TMEM150AQ86TG1 271 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 COMTD1Q86VU5 262 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 CPNE9Q8IYJ1 553 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 OR8K3Q8NH51 312 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 RAB3IL1Q8TBN0 382 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 SLC25A44Q96H78 314 aaPredicted RBP0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 TRIM62Q9BVG3 475 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 RWDD1Q9H446 243 aaPredicted RBP0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 VSIRQ9H7M9 311 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 MTFP1Q9UDX5 166 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 ADAM28Q9UKQ2 775 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 NUP50Q9UKX7 468 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 MPDZO75970 2070 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 MUC5ACP98088 5654 aa0.02□□□□□ -2.41
TRAJ48-201ENST00000390489 ISPDA4D126 451 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 IZUMO1RA6ND01 250 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 SIGLEC16A6NMB1 481 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 PPP1R2P9O14990 202 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 PRPSAP2O60256 369 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 KRT8P05787 483 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 UGT2B4P06133 528 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 TROVE2P10155 538 aaKnown RBP eCLIP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 GAP43P17677 238 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 PRPS1L1P21108 318 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 U2AF2P26368 475 aaKnown RBP eCLIP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 POLR2IP36954 125 aaKnown RBP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 EXOC3L2Q2M3D2 409 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ISLR2Q6UXK2 745 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 RTL4Q6ZR62 310 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ZNF767PQ75MW2 155 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 SLC25A29Q8N8R3 303 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ZFP41Q8N8Y5 198 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 UBAC2Q8NBM4 344 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 OR4F6Q8NGB9 312 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 CCDC110Q8TBZ0 833 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 SCFD1Q8WVM8 642 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 CCDC47Q96A33 483 aaKnown RBP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ZNF625Q96I27 306 aaPredicted RBP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 FMO2Q99518 471 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 TMEM9BQ9NQ34 198 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 FAM206AQ9NX38 181 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 CHRNA9Q9UGM1 479 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 NOL7Q9UMY1 257 aaKnown RBP0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ABCC9O60706 1549 aa0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 TRAV26-1A0A087WT03 109 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 SMIM26A0A096LP01 95 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 A0A1B0GWJ7 208 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 CLRN2A0PK11 232 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 PLPP1O14494 284 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 MAST4O15021 2626 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 CTAG2O75638 210 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 DIRAS3O95661 229 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 RAB36O95755 333 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 CLIC3O95833 236 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 HTR1DP28221 377 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 G6PCP35575 357 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 MDH1P40925 334 aaKnown RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 IMMTQ16891 758 aaKnown RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 CD300LGQ6UXG3 332 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 MROH5Q6ZUA9 1318 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 EFL1Q7Z2Z2 1120 aaKnown RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 BBS7Q8IWZ6 715 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 C19orf18Q8NEA5 215 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 OR8K1Q8NGG5 319 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 OR1S2Q8NGQ3 325 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 MGARPQ8TDB4 240 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 GHSRQ92847 366 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 TPPP3Q9BW30 176 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 KIR3DX1Q9H7L2 352 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 OR2S2Q9NQN1 319 aa0□□□□□ -2.41
TRAJ48-201ENST00000390489 BAZ1BQ9UIG0 1483 aaKnown RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 FARSAQ9Y285 508 aaKnown RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 CAB39Q9Y376 341 aaPredicted RBP0□□□□□ -2.41
TRAJ48-201ENST00000390489 MDC1Q14676 2089 aaKnown RBP-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 MICAL3Q7RTP6 2002 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 FHOD3Q2V2M9 1422 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 IGHV3OR16-9A0A0B4J2B5 98 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 A0A1W2PPV9 198 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 KLHL41O60662 606 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 CLPXO76031 633 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 TMEM50AO95807 157 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 OR5AC1P0C628 307 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 GZMAP12544 262 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 RPA2P15927 270 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 ZNF43P17038 809 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 MAPK3P27361 379 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 HNRNPH3P31942 346 aaKnown RBP-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 FOXN2P32314 431 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 KCNJ2P63252 427 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 IFITM3Q01628 133 aa-0.01□□□□□ -2.41
TRAJ48-201ENST00000390489 FGL1Q08830 312 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms