RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 THBS1P07996 1170 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 ACKR3P25106 362 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 DLX5P56178 289 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 SAXO2Q658L1 398 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 GALNT16Q8N428 558 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 SFT2D1Q8WV19 159 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 ZNF2Q9BSG1 426 aaPredicted RBP12.92□□□□□ -0.34
AGRN-201ENST00000379370 CNOT2Q9NZN8 540 aaKnown RBP12.92□□□□□ -0.34
AGRN-201ENST00000379370 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 J3KRW8 73 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 MAGEB1P43366 347 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 MRPL19P49406 292 aaKnown RBP12.92□□□□□ -0.34
AGRN-201ENST00000379370 CCR6P51684 374 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 CLEC2DQ9UHP7 191 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 POMT2Q9UKY4 750 aa12.92□□□□□ -0.34
AGRN-201ENST00000379370 CD3EP07766 207 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 CT55Q8WUE5 264 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 TEX37Q96LM6 180 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 C19orf53Q9UNZ5 99 aaPredicted RBP12.91□□□□□ -0.34
AGRN-201ENST00000379370 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 PRAF2O60831 178 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 OPN1MWP04001 364 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 HPNP05981 417 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 OPN1MW2P0DN77 364 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 OPN1MW3P0DN78 364 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 ANKRD60Q9BZ19 345 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 HMGN4O00479 90 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 COX6B1P14854 86 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 COL9A1P20849 921 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 SPRED1Q7Z699 444 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 SFTPA1Q8IWL2 248 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 FAM212BQ9NTI7 297 aaPredicted RBP12.91□□□□□ -0.34
AGRN-201ENST00000379370 SOD1P00441 154 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 TNFAIP6P98066 277 aaPredicted RBP12.91□□□□□ -0.34
AGRN-201ENST00000379370 SSPNQ14714 243 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 ACER2Q5QJU3 275 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
AGRN-201ENST00000379370 ZDHHC11BP0C7U3 371 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 NME1P15531 152 aaKnown RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 EIF3IQ13347 325 aaKnown RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 MDGA2Q7Z553 956 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 OR5B3Q8NH48 314 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 SOX7Q9BT81 388 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 URGCP-MRPS24S4R325 110 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 TERTO14746 1132 aaKnown RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 GFRA3O60609 400 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 PI3P19957 117 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 SRPXP78539 464 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 SHBQ15464 509 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 OR2T2Q6IF00 324 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 LRRC56Q8IYG6 542 aaPredicted RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 NKAIN3Q8N8D7 197 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 OR6M1Q8NGM8 313 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 CMBLQ96DG6 245 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 KIR2DS1A0A191URI9 304 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 COX7A2P2O60397 106 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 CA6P23280 308 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 MMP11P24347 488 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 KIR2DS4P43632 304 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 KIR2DS1Q14954 304 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 TCRBV3S1A0A5B6 114 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 C9orf172C9J069 976 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 UBL3O95164 117 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 CR2P20023 1033 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 POU3F3P20264 500 aaPredicted RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 SDHAP31040 664 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 GDPGP1Q6ZNW5 385 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 GALMQ96C23 342 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 MED17Q9NVC6 651 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 CYR61O00622 381 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 RPL3LQ92901 407 aaKnown RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 PAPLNO95428 1278 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 ABCD3P28288 659 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 NAAAQ02083 359 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
AGRN-201ENST00000379370 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
AGRN-201ENST00000379370 F5H697 171 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 FCMRO60667 390 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 SIX6O95475 246 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 UBBP0CG47 229 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 ARNTP27540 789 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
AGRN-201ENST00000379370 BAMBIQ13145 260 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 ZFP62Q8NB50 900 aaPredicted RBP12.89□□□□□ -0.35
AGRN-201ENST00000379370 SLC30A7Q8NEW0 376 aa12.89□□□□□ -0.35
AGRN-201ENST00000379370 OR1M1Q8NGA1 313 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms