RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 FAM184AQ8NB25 1140 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 OR2L8Q8NGY9 312 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 PTX4Q96A99 478 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 DCPSQ96C86 337 aaKnown RBP1.23□□□□□ -2.21
VPS13A-206ENST00000376646 FLYWCH2Q96CP2 140 aaKnown RBP1.23□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF488Q96MN9 340 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 CAMK2N2Q96S95 79 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 HSD17B10Q99714 261 aaKnown RBP1.23□□□□□ -2.21
VPS13A-206ENST00000376646 BCL7BQ9BQE9 202 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 CALN1Q9BXU9 219 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 OR2AG1Q9H205 316 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 TMEM27Q9HBJ8 222 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 SLC38A10Q9HBR0 1119 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 MED4Q9NPJ6 270 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 PRSS16Q9NQE7 514 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 DDX19AQ9NUU7 478 aaKnown RBP1.23□□□□□ -2.21
VPS13A-206ENST00000376646 MCUBQ9NWR8 336 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 HYOU1Q9Y4L1 999 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 UBIAD1Q9Y5Z9 338 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 TMEM14AQ9Y6G1 99 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 CACNA1AO00555 2505 aa1.23□□□□□ -2.21
VPS13A-206ENST00000376646 FHOD3Q2V2M9 1422 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 TNS2Q63HR2 1409 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 NUP214P35658 2090 aaPredicted RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 IGHV1-69DA0A0B4J2H0 117 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 A0A0U1RQV1 116 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 TMEM223A0PJW6 202 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 C5orf63A6NC05 138 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 A6NDN8 102 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 GABRR3A8MPY1 467 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 SERPINE3A8MV23 424 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 B4GALT5O43286 388 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ERI3O43414 337 aaKnown RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 SLC19A2O60779 497 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 HSBP1O75506 76 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FARS2O95363 451 aaKnown RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 APCSP02743 223 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 OR8U9P0C7N5 309 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 BMI1P35226 326 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FABP6P51161 128 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 NDUFA8P51970 172 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 DAOAP59103 153 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 TAS2R46P59540 309 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ATP6V0D1P61421 351 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 CYP24A1Q07973 514 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 SLC39A6Q13433 755 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 TSC22D1Q15714 1073 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FBXW9Q5XUX1 488 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FAM71E1Q6IPT2 247 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 UNC93AQ86WB7 457 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 PROKR2Q8NFJ6 384 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 OR4K5Q8NGD3 323 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 OR6N1Q8NGY5 312 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ITFG1Q8TB96 612 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 PIH1D2Q8WWB5 315 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ISOC2Q96AB3 205 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 SGTBQ96EQ0 304 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 CSPG4P5Q96PW8 444 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FGF23Q9GZV9 251 aaPredicted RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 OR52D1Q9H346 318 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 RGCCQ9H4X1 137 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 PEF1Q9UBV8 284 aaKnown RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 COMMD3-BMI1R4GMX3 469 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 IGKV2-28A0A075B6P5 120 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 LOC100653049A0A140TA62 436 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 PDZK1P1A8MUH7 402 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF705GA8MUZ8 300 aaPredicted RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ANKRD65E5RJM6 399 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 NDUFC2-KCTD14E9PQ53 114 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 RBFOX2O43251 390 aaKnown RBP eCLIP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 XRCC2O43543 280 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF207O43670 478 aaKnown RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 MPDU1O75352 247 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 REM1O75628 298 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 KRT34O76011 436 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 VAMP5O95183 116 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 IGKV2D-28P01615 120 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF806P0C7X5 589 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 PMCHP20382 165 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 RPL23P62829 140 aaKnown RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 CDK5Q00535 292 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 TFDP2Q14188 446 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF829Q3KNS6 432 aaPredicted RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 MPV17L2Q567V2 206 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 CDKL3Q8IVW4 592 aaPredicted RBP1.22□□□□□ -2.21
VPS13A-206ENST00000376646 CSGALNACT2Q8N6G5 542 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 OR52P1PQ8NH57 321 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 FRZBQ92765 325 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 NAT6Q93015 286 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 HAUS1Q96CS2 278 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 DYRK4Q9NR20 520 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 RGS18Q9NS28 235 aa1.22□□□□□ -2.21
VPS13A-206ENST00000376646 ADGRA3Q8IWK6 1321 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 CABIN1Q9Y6J0 2220 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 IGHV1OR15-9A0A0B4J2B8 117 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 SLC22A5O76082 557 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 SRMP19623 302 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 RAB5AP20339 215 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 NPY1RP25929 384 aa1.21□□□□□ -2.22
VPS13A-206ENST00000376646 GABRR2P28476 465 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms