RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	MRGPRG	Q86SM5	289 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	DND1	Q8IYX4	353 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	SEMA6D	Q8NFY4	1073 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	OR6Q1	Q8NGQ2	317 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	TAAR6	Q96RI8	345 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	SOX7	Q9BT81	388 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	PTDSS2	Q9BVG9	487 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	SPRR3	Q9UBC9	169 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	HECTD1	Q9ULT8	2610 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	CEP192	Q8TEP8	1941 aa		11.93	□□□□□ -0.5
DDR1-225	ENST00000376568	BET1	O15155	118 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	KNG1	P01042	644 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ALOX5AP	P20292	161 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	FKBP2	P26885	142 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	BLVRB	P30043	206 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TNFSF8	P32971	234 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	FAAP20	Q6NZ36	180 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	KCTD9	Q7L273	389 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	FAM214B	Q7L5A3	538 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ARHGEF39	Q8N4T4	335 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	BEST4	Q8NFU0	473 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	OR6X1	Q8NH79	312 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	OR8B4	Q96RC9	309 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	KCNJ16	Q9NPI9	418 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	NLK	Q9UBE8	527 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	NKX2-6	A6NCS4	301 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TMEM212	A6NML5	194 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ADAM10	O14672	748 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TRAF3IP2	O43734	574 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ACTL6A	O96019	429 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	NGF	P01138	241 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	PLAUR	Q03405	335 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	ZNF85	Q03923	595 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	RIPPLY1	Q0D2K3	151 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	FXN	Q16595	210 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	CMPK2	Q5EBM0	449 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	EMC4	Q5J8M3	183 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	UNQ6126/PRO20091	Q6UXV3	157 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	C9orf106	Q8NAJ2	232 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	EVA1A	Q9H8M9	152 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TRAV39	A0A0B4J263	110 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	BDKRB2	P30411	391 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	THBS2	P35442	1172 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	AP2S1	P53680	142 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TMEM200A	Q86VY9	491 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	CMBL	Q96DG6	245 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	OR2M2	Q96R28	347 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	URM1	Q9BTM9	101 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	LPAR2	Q9HBW0	351 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	DECR2	Q9NUI1	292 aa		11.92	□□□□□ -0.5
DDR1-225	ENST00000376568	TRAPPC2L	H3BP13	241 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	PTH2R	P49190	550 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	OR8G1	Q15617	311 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	SLC35D3	Q5M8T2	416 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	ZNF441	Q8N8Z8	693 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	ZNF454	Q8N9F8	522 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	BORCS5	Q969J3	196 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	GINS4	Q9BRT9	223 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	DXO	O77932	396 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	ZNF35	P13682	527 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	FBXW9	Q5XUX1	488 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	SFXN4	Q6P4A7	337 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	BTLA	Q7Z6A9	289 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	OR51F2	Q8NH61	342 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	S100Z	Q8WXG8	99 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	NGB	Q9NPG2	151 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	DMXL1	Q9Y485	3027 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	TUBAL3	A6NHL2	446 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	AMY2B	P19961	511 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	RBMX	P38159	391 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	CCL8	P80075	99 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	OR2A2	Q6IF42	318 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	DTX1	Q86Y01	620 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	GALNT11	Q8NCW6	608 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	FUZ	Q9BT04	418 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	OR2J1	Q9GZK6	312 aa		11.91	□□□□□ -0.5
DDR1-225	ENST00000376568	WDR12	Q9GZL7	423 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-225	ENST00000376568		A0A1W2PRD5	423 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568		A0A1W2PRF3	423 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568		A0A1W2PRM7	423 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	RBBP9	O75884	186 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	WNT11	O96014	354 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	SEMG1	P04279	462 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	SSX1	Q16384	188 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	PHYHD1	Q5SRE7	291 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	SYT6	Q5T7P8	510 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	FNDC7	Q5VTL7	733 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	DBX2	Q6ZNG2	339 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	ITGB1BP2	Q9UKP3	347 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	C13orf42	A0A1B0GVH6	325 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	SIRPB1	O00241	398 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	ABCD4	O14678	606 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	TOX	O94900	526 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	NRAS	P01111	189 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	NDUFB7	P17568	137 aa		11.9	□□□□□ -0.5
DDR1-225	ENST00000376568	HTR2C	P28335	458 aa		11.9	□□□□□ -0.5

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