RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 CD276Q5ZPR3 534 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 DOK3Q7L591 496 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 MRPS24Q96EL2 167 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 SLC25A21Q9BQT8 299 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 SYT5O00445 386 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TO15178 435 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TMPRSS11DO60235 418 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TIGITQ495A1 244 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TCTE3Q8IZS6 198 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 FBXL6Q8N531 539 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 PPT2Q9UMR5 302 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 LOC107986453A0A1B0GWG9 222 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 M0R296 226 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ADRA2CP18825 462 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TEAD1P28347 426 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 HSF1Q00613 529 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 DRAM2Q6UX65 266 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 OR10P1Q8NGE3 313 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 MAGT1Q9H0U3 335 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 KLF13Q9Y2Y9 288 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 M0R082 166 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF354AO60765 605 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 FPR3P25089 353 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 OPRM1P35372 400 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 RBP2P50120 134 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 RPL27P61353 136 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 DGCR2P98153 550 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 MAML2Q8IZL2 1156 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 STACQ99469 402 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 P4HTMQ9NXG6 502 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 SLC5A6Q9Y289 635 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 A0A0A6YYJ9 748 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 SLC2A10O95528 541 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 SLC25A4P12235 298 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 COL9A1P20849 921 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 ST8SIA4Q92187 359 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 AQP8O94778 261 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 SLC35D3Q5M8T2 416 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM99Q8N816 258 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 OR4C5Q8NGB2 326 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 MOB1AQ9H8S9 216 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 SPTY2D1-AS1A0A0U1RR47 76 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 QDPRP09417 244 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 PMCHP20382 165 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF528Q3MIS6 628 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 COMMD1Q8N668 190 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 C10orf90Q96M02 699 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 TAAR9Q96RI9 348 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 KIR2DS1A0A191URI9 304 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 SELEP16581 610 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 AKR1C3P42330 323 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 KIR2DS4P43632 304 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 BPIFB3P59826 476 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF816Q0VGE8 651 aaPredicted RBP12.98□□□□□ -0.33
TRAF1-201ENST00000373887 KIR2DS1Q14954 304 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 MAVSQ7Z434 540 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 NKAIN4Q8IVV8 208 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 OR2L13Q8N349 312 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 EXD3Q8N9H8 876 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 CLEC5AQ9NY25 188 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 CLDN15P56746 228 aa12.98□□□□□ -0.33
TRAF1-201ENST00000373887 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 OR2M5A3KFT3 312 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 MMP11P24347 488 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 ERHP84090 104 aaKnown RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 GLCCI1Q86VQ1 547 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 ZBTB44Q8NCP5 570 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 OR13C5Q8NGS8 318 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 LHX4Q969G2 390 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 COL18A1P39060 1754 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 A0A0B4J203 849 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CXCL13O43927 109 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 FGF7P21781 194 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 ENDOGQ14249 297 aaKnown RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 IHHQ14623 411 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 DMRTC1Q5HYR2 192 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM81Q6P7N7 255 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms