RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SLC6A9P48067 706 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 ZFP69Q49AA0 526 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 VASH2Q86V25 355 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 OR5AS1Q8N127 324 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 PTX4Q96A99 478 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 UQCC2Q9BRT2 126 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 MCUBQ9NWR8 336 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 DNAJC13O75165 2243 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 TNFRSF10AO00220 468 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 RBBP9O75884 186 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 DBHP09172 617 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 CST2P09228 141 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 H2AFB2P0C5Z0 115 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 RIPPLY2Q5TAB7 128 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 OR14K1Q8NGZ2 314 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 AKAP1Q92667 903 aaKnown RBP eCLIP17.19■□□□□ 0.34
HDAC1-201ENST00000373548 TMEM45BQ96B21 275 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 GHITMQ9H3K2 345 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 PTPRBP23467 1997 aa17.19■□□□□ 0.34
HDAC1-201ENST00000373548 IGKV3D-15A0A087WSY6 115 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 M0R135 149 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 ITGB2P05107 769 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 B4GALT1P15291 398 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 CAPZA1P52907 286 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 RAG2P55895 527 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 SRSF6Q13247 344 aaKnown RBP17.18■□□□□ 0.34
HDAC1-201ENST00000373548 HYAL4Q2M3T9 481 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 CEACAM16Q2WEN9 425 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 FAAP20Q6NZ36 180 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 PLXDC2Q6UX71 529 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 PGAP1Q75T13 922 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 UTS2BQ765I0 119 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 RNF144BQ7Z419 303 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 PRSS33Q8NF86 280 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF799Q96GE5 643 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 GPR35Q9HC97 309 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 FAM86C1Q9NVL1 165 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 A0A0U1RQV5 110 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 KLRC4-KLRK1H3BQV0 150 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 ERCC1P07992 297 aaPredicted RBP17.18■□□□□ 0.34
HDAC1-201ENST00000373548 RAB6AP20340 208 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 PRSS3P35030 304 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 RAB35Q15286 201 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF627Q7L945 461 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 OR56B4Q8NH76 319 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 FOXB1Q99853 325 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 C20orf85Q9H1P6 137 aa17.18■□□□□ 0.34
HDAC1-201ENST00000373548 SGCEO43556 437 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 CRYGSP22914 178 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF93P35789 620 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 SOX8P57073 446 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PPIAP62937 165 aaKnown RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 QRFPP83859 136 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PMPCAQ10713 525 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PCGF3Q3KNV8 242 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 MOGAT2Q3SYC2 334 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PAQR4Q8N4S7 273 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 MEIOBQ8N635 442 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 SPTSSAQ969W0 71 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 SPACA5Q96QH8 159 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 MOV10Q9HCE1 1003 aaKnown RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 CDK2AP1O14519 115 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 SYNGR3O43761 229 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 BPNT1O95861 308 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 CD46P15529 392 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PSMB1P20618 241 aaKnown RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 RRADP55042 308 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 UNC119Q13432 240 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 GSG1Q2KHT4 349 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 TCTE3Q8IZS6 198 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 ZFP62Q8NB50 900 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 GPX8Q8TED1 209 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 ITFG2Q969R8 447 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF486Q96H40 463 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 TP63Q9H3D4 680 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 PAQR5Q9NXK6 330 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 NKIRAS2Q9NYR9 191 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 RAB22AQ9UL26 194 aa17.17■□□□□ 0.34
HDAC1-201ENST00000373548 NOSIPQ9Y314 301 aaKnown RBP17.17■□□□□ 0.34
HDAC1-201ENST00000373548 A0A0A6YYH2 397 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 MEIS3P1A6NDR6 274 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 A6NJ64 397 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 NKX2-8O15522 239 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 APOC1P02654 83 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF32P17041 273 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF774Q6NX45 483 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.16■□□□□ 0.34
HDAC1-201ENST00000373548 RNF170Q96K19 258 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 ACTR6Q9GZN1 396 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 FLVCR2Q9UPI3 526 aa17.16■□□□□ 0.34
HDAC1-201ENST00000373548 PATE4P0C8F1 98 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 VSIG8P0DPA2 414 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 LIPCP11150 499 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 SCRN3Q0VDG4 424 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
HDAC1-201ENST00000373548 TSPO2Q5TGU0 170 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 GIMAP1Q8WWP7 306 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF552Q9H707 407 aaPredicted RBP17.15■□□□□ 0.34
HDAC1-201ENST00000373548 TAS2R8Q9NYW2 309 aa17.15■□□□□ 0.34
HDAC1-201ENST00000373548 V9GYS6 101 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms