RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 LMX1BO60663 402 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 TMIGD3P0DMS9 266 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 IGHV1-2P23083 117 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 GNALP38405 381 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 MAP1BP46821 2468 aaKnown RBP22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 EVX1P49640 407 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 HIKESHIQ53FT3 197 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 HES5Q5TA89 166 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 LRRC28Q86X40 367 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 SAMD12Q8N8I0 201 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 PROCRQ9UNN8 238 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 V9GYH0 126 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 E9PLN8 166 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 PAHP00439 452 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 LCATP04180 440 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 ANOS1P23352 680 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 TBRG1Q3YBR2 411 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 GLT8D1Q68CQ7 371 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 METAP1DQ6UB28 335 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 FAM131AQ6UXB0 335 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 DNAAF1Q8NEP3 725 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 ADAT3Q96EY9 351 aaPredicted RBP22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 ZNF391Q9UJN7 358 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 SPATA2Q9UM82 520 aa22.92■■□□□ 1.26
ATPAF1-202ENST00000371937 FAM25AB3EWG3 89 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 FAM25CB3EWG5 89 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 FAM25GB3EWG6 89 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 MTRF1O75570 445 aaKnown RBP22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 CFPP27918 469 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 STARD4Q96DR4 205 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 TP63Q9H3D4 680 aaPredicted RBP22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 PLEKHA1Q9HB21 404 aa22.91■■□□□ 1.26
ATPAF1-202ENST00000371937 CIB4A0PJX0 185 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 SNRPBP14678 240 aaKnown RBP22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 DDOSTP39656 456 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 HGFACQ04756 655 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 GSG1Q2KHT4 349 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 SNAI3Q3KNW1 292 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 CNIH2Q6PI25 160 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 GFRALQ6UXV0 394 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 NKAIN3Q8N8D7 197 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 LYZL4Q96KX0 146 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 CMTM3Q96MX0 182 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 LIN7BQ9HAP6 207 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 B3GNT2Q9NY97 397 aa22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 SPENQ96T58 3664 aaKnown RBP22.9■■□□□ 1.26
ATPAF1-202ENST00000371937 C5orf63A6NC05 138 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 ZNF503-AS2A6NEH8 195 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 DHRS3O75911 302 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 TOXO94900 526 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 CALCBP10092 127 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 HOXB1P14653 301 aaPredicted RBP22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 ELK1P19419 428 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 STOMP27105 288 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 TALDO1P37837 337 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 Q6ZSR3 168 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 PGAP1Q75T13 922 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 OR14K1Q8NGZ2 314 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 SGK3Q96BR1 496 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 RGCCQ9H4X1 137 aa22.89■■□□□ 1.26
ATPAF1-202ENST00000371937 CGAP01215 116 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 COX5AP20674 150 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 PTBP1P26599 531 aaKnown RBP eCLIP22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 XKRXQ6PP77 449 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 C1orf162Q8NEQ5 155 aaPredicted RBP22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 C10orf35Q96D05 121 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 BOD1Q96IK1 185 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 SOX7Q9BT81 388 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 CCDC32Q9BV29 185 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 NOX3Q9HBY0 568 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 CYSLTR2Q9NS75 346 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 ASF1BQ9NVP2 202 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 STEAP1Q9UHE8 339 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 V9GYS6 101 aa22.89■■□□□ 1.25
ATPAF1-202ENST00000371937 A0A0B4J203 849 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 LOC390937A0A1W2PQ73 354 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 TMEM8BA6NDV4 472 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 APOA1P02647 267 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 CD37P11049 281 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 RAB3AP20336 220 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 SCAND1P57086 179 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 UBE2NP61088 152 aaKnown RBP22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 KLRB1Q12918 225 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 GABRG1Q8N1C3 465 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 OR1M1Q8NGA1 313 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 OR5H6Q8NGV6 325 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 LGALS14Q8TCE9 139 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 FOXRED1Q96CU9 486 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 C1QTNF5Q9BXJ0 243 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 TMEM138Q9NPI0 162 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 CHD8Q9HCK8 2581 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 RTTNQ86VV8 2226 aa22.88■■□□□ 1.25
ATPAF1-202ENST00000371937 LOC100509620A0A075B734 347 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 RAD51DO75771 328 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 UPK1BO75841 260 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 LYZL6O75951 148 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 ERCC1P07992 297 aaPredicted RBP22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 BDKRB2P30411 391 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 SPOCK1Q08629 439 aa22.87■■□□□ 1.25
ATPAF1-202ENST00000371937 GABRA6Q16445 453 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms