RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SIRT5Q9NXA8 310 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 CD3DP04234 171 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 ADRA2CP18825 462 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 HRH1P35367 487 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 PSMB3P49720 205 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 MYBPHQ13203 477 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 AKR7LQ8NHP1 331 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 FYTTD1Q96QD9 318 aaKnown RBP17.72■□□□□ 0.43
LMO4-202ENST00000370544 AUNIPQ9H7T9 357 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 DNAJB12Q9NXW2 375 aaKnown RBP17.72■□□□□ 0.43
LMO4-202ENST00000370544 SIGLEC7Q9Y286 467 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 MN1Q10571 1320 aaPredicted RBP17.72■□□□□ 0.43
LMO4-202ENST00000370544 BTBD17A6NE02 478 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 RAB5CP51148 216 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 AQP6Q13520 282 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 ZNF718Q3SXZ3 478 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 SLC25A26Q70HW3 274 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 ANKRD37Q7Z713 158 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 WDR1O75083 606 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 GLI4P10075 376 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 EPXP11678 715 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 SLC25A35Q3KQZ1 300 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 LRP12Q9Y561 859 aa17.72■□□□□ 0.43
LMO4-202ENST00000370544 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 ZNF816-ZNF321PA0A0X1KG74 233 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 MPLP40238 635 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 RBPMSQ93062 196 aaKnown RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 FOXB1Q99853 325 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 NUP205Q92621 2012 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 F6UZH7 168 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 SCAF4O95104 1147 aaKnown RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 HOXB3P14651 431 aaPredicted RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 TBPP20226 339 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 ELLP55199 621 aaPredicted RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 NXPH1P58417 271 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 WIPI1Q5MNZ9 446 aaPredicted RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 MARC2Q969Z3 335 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 LINC01387J3KSC0 135 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 CELA2BP08218 269 aaPredicted RBP17.71■□□□□ 0.43
LMO4-202ENST00000370544 POU2F2P09086 479 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 GABRB1P18505 474 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 SUB1P53999 127 aaKnown RBP eCLIP17.71■□□□□ 0.43
LMO4-202ENST00000370544 SMIM15Q7Z3B0 74 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 OR8B4Q96RC9 309 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 NIPSNAP3BQ9BS92 247 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 CD160O95971 181 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 MGMTP16455 207 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 FXNQ16595 210 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 FAM185AQ8N0U4 392 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 OR10G3Q8NGC4 313 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 C3orf49Q96BT1 292 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 FLVCR2Q9UPI3 526 aa17.71■□□□□ 0.43
LMO4-202ENST00000370544 CDK5Q00535 292 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
LMO4-202ENST00000370544 IL34Q6ZMJ4 242 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 TCEAL7Q9BRU2 100 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 FOXJ3Q9UPW0 622 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 ST3GAL6Q9Y274 331 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 TRGV8A0A0C4DH27 118 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 ZNF705GA8MUZ8 300 aaPredicted RBP17.7■□□□□ 0.42
LMO4-202ENST00000370544 TOMM34Q15785 309 aaPredicted RBP17.7■□□□□ 0.42
LMO4-202ENST00000370544 SFTPA1Q8IWL2 248 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 C1orf87Q8N0U7 546 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OR10X1Q8NGY0 326 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OR4C3Q8NH37 302 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 TERTO14746 1132 aaKnown RBP17.7■□□□□ 0.42
LMO4-202ENST00000370544 FCGR2CP31995 323 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 EIF3IQ13347 325 aaKnown RBP17.7■□□□□ 0.42
LMO4-202ENST00000370544 KCNRGQ8N5I3 272 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 PLA2G3Q9NZ20 509 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 ZFP92A6NM28 416 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OR2F2O95006 317 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 FAHP16930 419 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 ATF1P18846 271 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 THBS4P35443 961 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 RAC1P63000 192 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OR2F1Q13607 317 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OR2B11Q5JQS5 317 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 OSR2Q8N2R0 312 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 GPR32P1Q8NGA4 272 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 SFT2D1Q8WV19 159 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 DERL3Q96Q80 235 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 C20orf141Q9NUB4 165 aa17.7■□□□□ 0.42
LMO4-202ENST00000370544 SLC25A1P53007 311 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 CLDN20P56880 219 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 C9orf152Q5JTZ5 239 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 MFSD4AQ8N468 514 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 KISS1RQ969F8 398 aaPredicted RBP17.69■□□□□ 0.42
LMO4-202ENST00000370544 RNF32Q9H0A6 362 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 P4HTMQ9NXG6 502 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 K7EQS6 105 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 HLA-HP01893 362 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 FABP6P51161 128 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 UBE2MP61081 183 aaKnown RBP17.69■□□□□ 0.42
LMO4-202ENST00000370544 FAM27D1Q5T7N8 215 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 TMEM182Q6ZP80 229 aaPredicted RBP17.69■□□□□ 0.42
LMO4-202ENST00000370544 SSX9Q7RTT3 188 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 TMPRSS7Q7RTY8 843 aa17.69■□□□□ 0.42
LMO4-202ENST00000370544 OR11G2Q8NGC1 345 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms