RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TMEM204Q9BSN7 226 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 SLC25A32Q9H2D1 315 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 EGLN3Q9H6Z9 239 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 METTL17Q9H7H0 456 aaPredicted RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 GP6Q9HCN6 339 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 TAS2R5Q9NYW4 299 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 FREM1Q5H8C1 2179 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 TLN2Q9Y4G6 2542 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 A0A0G2JK05 382 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 UBE2QL1A1L167 161 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 FAM171A2A8MVW0 826 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 MCRIP1C9JLW8 97 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 M0R3H8 397 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 TNFSF11O14788 317 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 GMFGO60234 142 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 LY6G6DO95868 133 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 HPGDP15428 266 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 SHC1P29353 583 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 AGTR1P30556 359 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 P2RX1P51575 399 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 GK2Q14410 553 aaPredicted RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 CBLN3Q6UW01 205 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 ZNF620Q6ZNG0 422 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 CEACAM19Q7Z692 300 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
LMO4-201ENST00000370542 CLRN3Q8NCR9 226 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 BVESQ8NE79 360 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 RNF128Q8TEB7 428 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 RAB8BQ92930 207 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 PLA2G12AQ9BZM1 189 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 KLHL9Q9P2J3 617 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 MGAT4CQ9UBM8 478 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 KCNE3Q9Y6H6 103 aa13.11□□□□□ -0.31
LMO4-201ENST00000370542 ARPC4-TTLL3A0A0A6YYG9 625 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 OIP5O43482 229 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 SMPD2O60906 423 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 KRT33AO76009 404 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 SYNGR4O95473 234 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 HIST1H2ABP04908 130 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 NMBP08949 121 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 TFPIP10646 304 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 HOXA1P49639 335 aaPredicted RBP13.1□□□□□ -0.31
LMO4-201ENST00000370542 CARD18P57730 90 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
LMO4-201ENST00000370542 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 SYPL1Q16563 259 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 ZNF239Q16600 458 aaKnown RBP13.1□□□□□ -0.31
LMO4-201ENST00000370542 BEX5Q5H9J7 111 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 Q5PR19 223 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 HIST3H2AQ7L7L0 130 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 SZRD1Q7Z422 152 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 ADAMTS15Q8TE58 950 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 XAGE5Q8WWM1 108 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 HIST1H2ACQ93077 130 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 CPNE4Q96A23 557 aaPredicted RBP13.1□□□□□ -0.31
LMO4-201ENST00000370542 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 ELMOD3Q96FG2 381 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 LINC00052Q96N35 136 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 GPA33Q99795 319 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 IFT22Q9H7X7 185 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 FANCFQ9NPI8 374 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 CLEC4AQ9UMR7 237 aa13.1□□□□□ -0.31
LMO4-201ENST00000370542 USF3Q68DE3 2245 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 GPRIN2O60269 458 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 OPN1LWP04000 364 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 GUSBP08236 651 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 CD3GP09693 182 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 UBBP0CG47 229 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 UBCP0CG48 685 aaKnown RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 GDNFP39905 211 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 CBX5P45973 191 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 SCAND1P57086 179 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 ZP1P60852 638 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 SEC61A1P61619 476 aaKnown RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 ACTA2P62736 377 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 RPS27AP62979 156 aaKnown RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms