RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PPA2Q9H2U2 334 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 DNAJB11Q9UBS4 358 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
SSR4-204ENST00000370087 FAM96BQ9Y3D0 163 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 SNX13Q9Y5W8 968 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 BBIP1A8MTZ0 92 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 XKRYO14609 159 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 FFAR1O14842 300 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 SNX3O60493 162 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
SSR4-204ENST00000370087 ACSM4P0C7M7 580 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 CA6P23280 308 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 EFNB2P52799 333 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 ST3GAL3Q11203 375 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 KCNMB1Q16558 191 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 CDONQ4KMG0 1287 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 CYBRD1Q53TN4 286 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 NANOGP8Q6NSW7 305 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 CFAP77Q6ZQR2 320 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 Q6ZTK2 550 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 FAM156AQ8NDB6 213 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 CFHR4Q92496 578 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 TSSK2Q96PF2 358 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 ADAT1Q9BUB4 502 aaKnown RBP12.62□□□□□ -0.39
SSR4-204ENST00000370087 HCAR1Q9BXC0 346 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 FN3KRPQ9HA64 309 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 ONECUT1Q9UBC0 465 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 FBLN5Q9UBX5 448 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
SSR4-204ENST00000370087 NOTCH3Q9UM47 2321 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 MEGF11A6BM72 1044 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 FXYD1O00168 92 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 DCTN6O00399 190 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 PTBP3O95758 552 aaKnown RBP12.61□□□□□ -0.39
SSR4-204ENST00000370087 FBP1P09467 338 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 GABRA5P31644 462 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 TGFBR2P37173 567 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 KLF10Q13118 480 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 CYLC2Q14093 348 aaPredicted RBP12.61□□□□□ -0.39
SSR4-204ENST00000370087 OR8G1Q15617 311 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 KCNJ8Q15842 424 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 LRRC23Q53EV4 343 aaPredicted RBP12.61□□□□□ -0.39
SSR4-204ENST00000370087 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 OFCC1Q8IZS5 231 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 GCSAMQ8N6F7 178 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 Q8N7P7 452 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 SLCO4A1Q96BD0 722 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 TPD52L3Q96J77 140 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 VSX1Q9NZR4 365 aaPredicted RBP12.61□□□□□ -0.39
SSR4-204ENST00000370087 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 KPTNQ9Y664 436 aa12.61□□□□□ -0.39
SSR4-204ENST00000370087 A0A087WUU8 490 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 A0A1B0GVI7 797 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 SOCS2O14508 198 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 NPFFO15130 113 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 AHCYL1O43865 530 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 DCTN3O75935 186 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 NPPAP01160 153 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 ANKDD1AQ495B1 522 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 LINC00346Q8IVM7 164 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 GALNT4Q8N4A0 578 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 KLHDC1Q8N7A1 406 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 LY6G5BQ8NDX9 201 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 PHF21AQ96BD5 680 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 SH3GL1Q99961 368 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 NMNAT1Q9HAN9 279 aaPredicted RBP12.6□□□□□ -0.39
SSR4-204ENST00000370087 NECAP2Q9NVZ3 263 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 ADA2Q9NZK5 511 aa12.6□□□□□ -0.39
SSR4-204ENST00000370087 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 F5H5K5 113 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 FAM107AO95990 144 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 SDHAP31040 664 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 SAA4P35542 130 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 CDKN2AP42771 156 aaKnown RBP12.59□□□□□ -0.39
SSR4-204ENST00000370087 FXYD6P3P58550 94 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 ZBED5Q49AG3 693 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
SSR4-204ENST00000370087 VTCN1Q7Z7D3 282 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 FAM216BQ8N7L0 139 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
SSR4-204ENST00000370087 C17orf50Q8WW18 174 aa12.59□□□□□ -0.39
SSR4-204ENST00000370087 SPRYD4Q8WW59 207 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms