RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 TCP1P17987 556 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 POLR2IP36954 125 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 OPRK1P41145 380 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 RBM34P42696 430 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 FABP6P51161 128 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 CCNG1P51959 295 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF121P58317 390 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 CYP24A1Q07973 514 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 NCF4Q15080 339 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 RPEL1Q2QD12 228 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 COX19Q49B96 90 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 MPV17L2Q567V2 206 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 SHISA6Q6ZSJ9 500 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 HMGN2P46Q86SG4 172 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 HORMAD1Q86X24 394 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 JAGN1Q8N5M9 183 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 COMMD1Q8N668 190 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF645Q8N7E2 425 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 OR10W1Q8NGF6 305 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 OR6Q1Q8NGQ2 317 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 OR10C1Q96KK4 312 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 HSD17B10Q99714 261 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 GGTLC1Q9BX51 225 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 OR2AG1Q9H205 316 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 PIGUQ9H490 435 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF442Q9H7R0 627 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 MRM3Q9HC36 420 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 PRSS16Q9NQE7 514 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 PXMP2Q9NR77 195 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 DDX19AQ9NUU7 478 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 YARS2Q9Y2Z4 477 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGHV1-69DA0A0B4J2H0 117 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF99A8MXY4 864 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ERI3O43414 337 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 SEMA3DO95025 777 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TDP2O95551 362 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 CCNE2O96020 404 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 IGLV3-25P01717 112 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 HLA-DQA1P01909 254 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 KRT16P08779 473 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TNFSF9P41273 254 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TAS2R31P59538 309 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TAS2R46P59540 309 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 IFT88Q13099 833 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ART3Q13508 389 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 CHRFAM7AQ494W8 412 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 HIKESHIQ53FT3 197 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TCEAL5Q5H9L2 206 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 PIP5KL1Q5T9C9 394 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 STUMQ69YW2 141 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ADNP2Q6IQ32 1131 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ZFP1Q6P2D0 407 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF880Q6PDB4 577 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 NEGR1Q7Z3B1 354 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 SNX20Q7Z614 316 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 OSR2Q8N2R0 312 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 NECAP1Q8NC96 275 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 BBOF1Q8ND07 529 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 CA5BP1Q8WTZ4 195 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 PEX13Q92968 403 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TCEAL3Q969E4 200 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 APH1AQ96BI3 265 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 DCPSQ96C86 337 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 SGTBQ96EQ0 304 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 C18orf15Q96N68 181 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 RBBP8Q99708 897 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TIMM29Q9BSF4 260 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF2Q9BSG1 426 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 NAA50Q9GZZ1 169 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 C8orf33Q9H7E9 229 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 TMEM27Q9HBJ8 222 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 MYOZ1Q9NP98 299 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 MED4Q9NPJ6 270 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 GGA2Q9UJY4 613 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 RHBDD3Q9Y3P4 386 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 FHOD3Q2V2M9 1422 aa1.9□□□□□ -2.11
ECHDC1-201ENST00000368287 COL1A2P08123 1366 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 TRAV19A0A0A6YYK7 116 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 A0A1B0GTQ1 180 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 A6NDN8 102 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 SLC19A2O60779 497 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 SERPINB7O75635 380 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 SLC22A5O76082 557 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 GLSO94925 669 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 FGFR1OPO95684 399 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 HPRT1P00492 218 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 STAG3L3P0CL85 134 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 CXCL12P48061 93 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 CLDN8P56748 225 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 ATP6V0D1P61421 351 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 CRADDP78560 199 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 RAD51Q06609 339 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 SLC39A6Q13433 755 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF547Q8IVP9 402 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 VKORC1L1Q8N0U8 176 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms