RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TRAF3IP2O43734 574 aaPredicted RBP12.67□□□□□ -0.38
CD48-201ENST00000368045 SSX5O60225 188 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 NR2C1P13056 603 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 PTGDSP41222 190 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CBX5P45973 191 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 STARP49675 285 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 DCDP81605 110 aaKnown RBP12.67□□□□□ -0.38
CD48-201ENST00000368045 FOXK1P85037 733 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 PXDC1Q5TGL8 231 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CFAP77Q6ZQR2 320 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 TMPRSS9Q7Z410 1059 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CPEB2Q7Z5Q1 589 aaKnown RBP12.67□□□□□ -0.38
CD48-201ENST00000368045 HOGA1Q86XE5 327 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 STPG2Q8N412 459 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 GVQW1Q8N7I0 195 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 OR51E1Q8TCB6 317 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 ST8SIA4Q92187 359 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 OXGR1Q96P68 337 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CDC6Q99741 560 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 SELENOIQ9C0D9 397 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 C19orf25Q9UFG5 118 aaPredicted RBP12.67□□□□□ -0.38
CD48-201ENST00000368045 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
CD48-201ENST00000368045 KCNK7Q9Y2U2 307 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CACNA1CQ13936 2221 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 CEACAM18A8MTB9 384 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 DCNP07585 359 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 GNB3P16520 340 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 PRKXP51817 358 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 GABREP78334 506 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 OR52W1Q6IF63 320 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 DOK3Q7L591 496 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 TMEM17Q86X19 198 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 ZNF101Q8IZC7 436 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 OR2M3Q8NG83 312 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 OR10K1Q8NGX5 313 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 OR4K15Q8NH41 348 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 FBXW5Q969U6 566 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 MYOTQ9UBF9 498 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 GPR160Q9UJ42 338 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 FREM3P0C091 2139 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 A0A0B4J2A0 478 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 DBX1A6NMT0 343 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 OR2AT4A6NND4 320 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 SHISA8B8ZZ34 492 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 ADH6P28332 368 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 CX3CR1P49238 355 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 ATP1B3P54709 279 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 GRB2P62993 217 aaKnown RBP12.66□□□□□ -0.38
CD48-201ENST00000368045 HIST3H3Q16695 136 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 GLIPR1L1Q6UWM5 242 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 SPEM1Q8N4L4 309 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 OR56B1Q8NGI3 324 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 SCGB3A2Q96PL1 93 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 SEC61A2Q9H9S3 476 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 COQ3Q9NZJ6 369 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 SHPKQ9UHJ6 478 aa12.66□□□□□ -0.38
CD48-201ENST00000368045 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 SEC16AO15027 2179 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 SULT2B1O00204 365 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 LGALS8O00214 317 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 CCSO14618 274 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 TLX3O43711 291 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 SCRG1O75711 98 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 WDPCPO95876 746 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 MYF5P13349 255 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 CTSSP25774 331 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 FOXL2P58012 376 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 BTN1A1Q13410 526 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 ABHD12BQ7Z5M8 362 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 RELL2Q8NC24 303 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 OR8B12Q8NGG6 310 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 C1orf147Q96MC9 270 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 NMES1Q9C002 83 aa12.65□□□□□ -0.38
CD48-201ENST00000368045 BARX1Q9HBU1 254 aaPredicted RBP12.65□□□□□ -0.38
CD48-201ENST00000368045 GHRLQ9UBU3 117 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms