RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PINX1Q96BK5 328 aaKnown RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 UPRTQ96BW1 309 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 C20orf141Q9NUB4 165 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 ACSM1Q08AH1 577 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 C12orf73Q69YU5 71 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 SUMF1Q8NBK3 374 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 MASP2O00187 686 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 CYR61O00622 381 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 NTN1O95631 604 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 GSK3AP49840 483 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 SULT4A1Q9BR01 284 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 SCPEP1Q9HB40 452 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM74BQ9NUR3 256 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 GDF9O60383 454 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 PMP2P02689 132 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 GALNSP34059 522 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 UCNP55089 124 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 PSG6Q00889 435 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF573Q86YE8 665 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF321PQ8N8H1 164 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 OR8B4Q96RC9 309 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 UBL7Q96S82 380 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 EXOSC3Q9NQT5 275 aaKnown RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 PPP1R3CQ9UQK1 317 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 LRRC37AA6NMS7 1700 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 AQP7O14520 342 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 AGPAT2O15120 278 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 CLDN1O95832 211 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 APOA2P02652 100 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 SMIM18P0DKX4 95 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 KITLGP21583 273 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 M1APQ8TC57 530 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 APOBEC3DQ96AK3 386 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 RGCCQ9H4X1 137 aa10.4□□□□□ -0.74
SYNE1-204ENST00000367248 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-204ENST00000367248 APOC3P02656 99 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 TCRBP04435 133 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 CD3EP07766 207 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 PCBP3P57721 371 aaKnown RBP10.4□□□□□ -0.75
SYNE1-204ENST00000367248 RNPS1Q15287 305 aaKnown RBP10.4□□□□□ -0.75
SYNE1-204ENST00000367248 KCNJ8Q15842 424 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 EIF2S3LQ2VIR3 472 aaKnown RBP10.4□□□□□ -0.75
SYNE1-204ENST00000367248 HFEQ30201 348 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 TMEM108Q6UXF1 575 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF767PQ75MW2 155 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 MOB3BQ86TA1 216 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 PRSS35Q8N3Z0 413 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 B8ZZF3 427 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 SH2D1BO14796 132 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.75
SYNE1-204ENST00000367248 NOXA1Q86UR1 476 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 SLC25A46Q96AG3 418 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 VSTM2LQ96N03 204 aa10.4□□□□□ -0.75
SYNE1-204ENST00000367248 UNKLQ9H9P5 680 aaKnown RBP10.4□□□□□ -0.75
SYNE1-204ENST00000367248 COX7A1P24310 79 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 OGFOD3Q6PK18 319 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 PLXDC2Q6UX71 529 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 OR4Q3Q8NH05 313 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 OTOSQ8NHW6 89 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 SLAMF9Q96A28 289 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 H3BMH7 237 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 TGM1P22735 817 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 S100A2P29034 98 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 HMGA2P52926 109 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 FUT7Q11130 342 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 DOC2BQ14184 412 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 LINC00299Q6ZSB3 139 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 OR13C5Q8NGS8 318 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 SLC23A1Q9UHI7 598 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 CCL27Q9Y4X3 112 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 TCRBV16S1A1N1A0A5B0 115 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 FOXS1O43638 330 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 SRP9P49458 86 aaKnown RBP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 RAB13P51153 203 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 BLOC1S1P78537 153 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 GIMAP1Q8WWP7 306 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 NECAP2Q9NVZ3 263 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 A0A1W2PS29 197 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 CNR1P21554 472 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 SNTB1Q13884 538 aaKnown RBP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 C11orf54Q9H0W9 315 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-204ENST00000367248 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 RNF150Q9ULK6 438 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 TRPM6Q9BX84 2022 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 CPEP16870 476 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 PDCD1Q15116 288 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 BEX5Q5H9J7 111 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 OR2T2Q6IF00 324 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 DPPA2Q7Z7J5 298 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms