RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PAX6P26367 422 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 GABREP78334 506 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 TESK1Q15569 626 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ATRAIDQ6UW56 229 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 GVQW1Q8N7I0 195 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 MRPL43Q8N983 215 aaKnown RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SLAMF6Q96DU3 332 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC35B3Q9H1N7 401 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 OR6C6A6NF89 314 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 H7BYZ3 331 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 GATCO43716 136 aaKnown RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 GALR3O60755 368 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 ALOX12BO75342 701 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 TRAPPC6AO75865 159 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 HOXB3P14651 431 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 RAB5AP20339 215 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 NPBWR1P48145 328 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 IKZF1Q13422 519 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 HNF4GQ14541 408 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 PRSS53Q2L4Q9 553 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 TFAP2EQ6VUC0 442 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 C16orf52Q8NHV5 167 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 STT3BQ8TCJ2 826 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 PIK3IP1Q96FE7 263 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 TOE1Q96GM8 510 aaKnown RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 LPAR4Q99677 370 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 ZCCHC4Q9H5U6 513 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 NPDC1Q9NQX5 325 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 CXorf51AA0A1B0GTR3 108 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 SHISA6Q6ZSJ9 500 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 UBE3DQ7Z6J8 389 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 MITD1Q8WV92 249 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 PGLYRP3Q96LB9 341 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF681Q96N22 645 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 EMC6Q9BV81 110 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 FRRS1LQ9P0K9 344 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 POMT1Q9Y6A1 747 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 OR2A4O95047 310 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 B2MP61769 119 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 NPSR1Q6W5P4 371 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 DEFB119Q8N690 84 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 AP1S3Q96PC3 154 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 OR2A7Q96R45 310 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 NRIP2Q9BQI9 281 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 DNAJB11Q9UBS4 358 aa14.41□□□□□ -0.1
CLSTN1-201ENST00000361311 BTBD17A6NE02 478 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 RABIFP47224 123 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 FAM199XQ6PEV8 388 aaPredicted RBP14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 GNPNAT1Q96EK6 184 aaPredicted RBP14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TLNRD1Q9H1K6 362 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SUSD2Q9UGT4 822 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TCRBV21S2A2A0A5A6 115 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SFT2D2O95562 160 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 ZGLP1P0C6A0 271 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 G0S2P27469 103 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF77Q15935 545 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 ALKBH2Q6NS38 261 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 WDR5BQ86VZ2 330 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SGK3Q96BR1 496 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 CBY1Q9Y3M2 126 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 RP1P56715 2156 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 NXPH3O95157 252 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 GPANK1O95872 356 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TIMP1P01033 207 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 GJA4P35212 333 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 C19orf47Q8N9M1 422 aaKnown RBP14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC25A38Q96DW6 304 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TVP23CQ96ET8 276 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TEX101Q9BY14 249 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 LRP12Q9Y561 859 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SIPA1L1O43166 1804 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 BRWD1Q9NSI6 2320 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SEMA7AO75326 666 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC25A4P12235 298 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 FGF7P21781 194 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 TSTD1Q8NFU3 115 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 OR10AC1Q8NH08 325 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 S1PR5Q9H228 398 aa14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 DNAJB12Q9NXW2 375 aaKnown RBP14.4□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF727A8MUV8 499 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 NKX2-2O95096 273 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 RECKO95980 971 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 ZNF133P52736 654 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 EFNB2P52799 333 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 SLC35A1P78382 337 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 RFLNBQ8N5W9 214 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 OR1E3Q8WZA6 343 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 MS4A3Q96HJ5 214 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 TXNIPQ9H3M7 391 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 MMP25Q9NPA2 562 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 GDF2Q9UK05 429 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 SEMA4FO95754 770 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 QDPRP09417 244 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 OPRM1P35372 400 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 TAS2R30P59541 319 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 FAHD2BQ6P2I3 314 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms