RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LYRM1O43325 122 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 RAB3AP20336 220 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 ANOS1P23352 680 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 FAM57BQ71RH2 274 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 LRRC18Q8N456 261 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 OR51A2Q8NGJ7 313 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 PP6455Q8WZ26 134 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 PGAM5Q96HS1 289 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 PLEK2Q9NYT0 353 aa15.05■□□□□ -0
VPS13B-201ENST00000355155 TMEM272A0A1B0GTI8 110 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 DOK2O60496 412 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 PFDN1O60925 122 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 CTAG2O75638 210 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 FARS2O95363 451 aaKnown RBP15.04■□□□□ -0
VPS13B-201ENST00000355155 BPNT1O95861 308 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 POU3F4P49335 361 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 KLF9Q13886 244 aaPredicted RBP15.04■□□□□ -0
VPS13B-201ENST00000355155 OR10A2Q9H208 303 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 hCG_2014768A0A024R1R8 64 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 SLC22A20A6NK97 555 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 LANCL1O43813 399 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 SSX4O60224 188 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 GSK3AP49840 483 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 ZBTB37Q5TC79 503 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 CHMP1BQ7LBR1 199 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 OR2W3Q7Z3T1 314 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 C1QTNF5Q9BXJ0 243 aa15.04■□□□□ -0
VPS13B-201ENST00000355155 TRAPPC2P0DI81 140 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 TRAPPC2BP0DI82 140 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 B4GALT1P15291 398 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 SLC6A1P30531 599 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 KIR2DL3P43628 341 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 RSPO4Q2I0M5 234 aaPredicted RBP15.03■□□□□ -0
VPS13B-201ENST00000355155 SLC16A14Q7RTX9 510 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 NUFIP2Q7Z417 695 aaKnown RBP15.03■□□□□ -0
VPS13B-201ENST00000355155 ZNF775Q96BV0 537 aaPredicted RBP15.03■□□□□ -0
VPS13B-201ENST00000355155 MED12Q93074 2177 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 SULT1C2O00338 296 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 MTRF1O75570 445 aaKnown RBP15.03■□□□□ -0
VPS13B-201ENST00000355155 TGM6O95932 706 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 CDK2P24941 298 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 CLDN12P56749 244 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 TAS2R20P59543 309 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 ARF1P84077 181 aaKnown RBP15.03■□□□□ -0
VPS13B-201ENST00000355155 PLA1AQ53H76 456 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 BIVMQ86UB2 503 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 PRRG4Q9BZD6 226 aa15.03■□□□□ -0
VPS13B-201ENST00000355155 ECDO95905 644 aaPredicted RBP15.02■□□□□ -0
VPS13B-201ENST00000355155 BTCP35070 178 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 TMEM42Q69YG0 159 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 OR51D1Q8NGF3 324 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 FGFBP3Q8TAT2 258 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 SARAFQ96BY9 339 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 NEDD4LQ96PU5 975 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 MARVELD1Q9BSK0 173 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 CHST5Q9GZS9 411 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 CALHM2Q9HA72 323 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 CFAP54Q96N23 3096 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 ZNF20P17024 532 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 MPGP29372 298 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 PMP22Q01453 160 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 GLYATL3Q5SZD4 288 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 ZNF774Q6NX45 483 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 CRIP3Q6Q6R5 217 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 LUZP2Q86TE4 346 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 CDH24Q86UP0 819 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 WNT2BQ93097 391 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 SGK3Q96BR1 496 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 GHRLQ9UBU3 117 aa15.02■□□□□ -0
VPS13B-201ENST00000355155 GGT3PA6NGU5 568 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 AHRRA9YTQ3 701 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 SCGNO76038 276 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 ARR3P36575 388 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 DGCR2P98153 550 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 HGFACQ04756 655 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 TAB1Q15750 504 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 FBXW9Q5XUX1 488 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 OLFML2AQ68BL7 652 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 MCEMP1Q8IX19 187 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 ZNF107Q9UII5 783 aaPredicted RBP15.02□□□□□ -0.01
VPS13B-201ENST00000355155 RAB22AQ9UL26 194 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 CACNG2Q9Y698 323 aa15.02□□□□□ -0.01
VPS13B-201ENST00000355155 TMEM14DPA8MWL7 114 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 BTG1P62324 171 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 GPR176Q14439 515 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 NAA40Q86UY6 237 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 CNTD2Q9H8S5 307 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 B3GNT2Q9NY97 397 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 MSRB2Q9Y3D2 182 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 C5orf63A6NC05 138 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 NAP1L6A6NFF2 107 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 EEF1E1O43324 174 aaKnown RBP15.01□□□□□ -0.01
VPS13B-201ENST00000355155 UBBP0CG47 229 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 HOXB1P14653 301 aaPredicted RBP15.01□□□□□ -0.01
VPS13B-201ENST00000355155 ARSBP15848 533 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 RAG2P55895 527 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 SPOCK1Q08629 439 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 PLA2G7Q13093 441 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 TMEM69Q5SWH9 247 aa15.01□□□□□ -0.01
VPS13B-201ENST00000355155 OR52N4Q8NGI2 321 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms