RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 MUC21Q5SSG8 566 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 TMEM207Q6UWW9 146 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ADIPOR2Q86V24 386 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 NECAP1Q8NC96 275 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 CD200R1Q8TD46 325 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 CLSTN3Q9BQT9 956 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 C1QTNF5Q9BXJ0 243 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ACTR3CQ9C0K3 210 aaPredicted RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 ADGRL4Q9HBW9 690 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 V9GY05 133 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 FER1L6Q2WGJ9 1857 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 CDK5RAP2Q96SN8 1893 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 TMEM200CA6NKL6 621 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 A8MXK9 166 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 PRAMEF26H0Y7S4 382 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 PHF1O43189 567 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 SNAPINO95295 136 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 TCRBP04435 133 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 CD99P14209 185 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 GPX2P18283 190 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 NFYAP23511 347 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 HOXA1P49639 335 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 ACVR1Q04771 509 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 TWIST1Q15672 202 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 GGTA1PQ4G0N0 100 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 ZNF776Q68DI1 518 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 SLC22A15Q8IZD6 547 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 OR6V1Q8N148 313 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 C12orf45Q8N5I9 185 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 OR52I1Q8NGK6 324 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 OR5AK3PQ8NH89 298 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 GPX8Q8TED1 209 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.34□□□□□ -1.56
RFC1-201ENST00000349703 GLMPQ8WWB7 406 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 OSTF1Q92882 214 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 ABHD6Q9BV23 337 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 ZNF226Q9NYT6 803 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 FBXO7Q9Y3I1 522 aa5.34□□□□□ -1.56
RFC1-201ENST00000349703 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 C1orf196B1AJZ1 125 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 K7ESF4 209 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 WNT10BO00744 389 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 PCDH7O60245 1069 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 CLDN11O75508 207 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 PAK4O96013 591 aaPredicted RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 IFNGP01579 166 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 NSG1P42857 185 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 IER3P46695 156 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 B2MP61769 119 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 RNLSQ5VYX0 342 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 MED27Q6P2C8 311 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ABHD12BQ7Z5M8 362 aaPredicted RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR52E1Q8NGJ3 308 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR1N2Q8NGR9 330 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR52P1PQ8NH57 321 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR9G1Q8NH87 305 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 FCAMRQ8WWV6 532 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 LRR1Q96L50 414 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 TMEM175Q9BSA9 504 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 CLEC7AQ9BXN2 247 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 RPS6KB2Q9UBS0 482 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 C1QTNF9BB2RNN3 333 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 TOXO94900 526 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 SOX14O95416 240 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 APOA2P02652 100 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 HOXB2P14652 356 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 NAA10P41227 235 aaPredicted RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 POU3F4P49335 361 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 TCTAP57738 103 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 LCN2P80188 198 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ILKQ13418 452 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ZCCHC12Q6PEW1 402 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 QSOX2Q6ZRP7 698 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 YRDCQ86U90 279 aaKnown RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 RNF152Q8N8N0 203 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 NUP37Q8NFH4 326 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ASB13Q8WXK3 278 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 SLC25A10Q9UBX3 287 aaPredicted RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 TSPAN11A1L157 253 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR2AT4A6NND4 320 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 FCGR3BO75015 233 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 IGSF6O95976 241 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 NR2C1P13056 603 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ITGB7P26010 798 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 OR1E2P47887 323 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 EVX1P49640 407 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 KHKP50053 298 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 NFATC4Q14934 902 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 ZXDCQ2QGD7 858 aaPredicted RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 MS4A13Q5J8X5 152 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 EIF5AL1Q6IS14 154 aaKnown RBP5.33□□□□□ -1.56
RFC1-201ENST00000349703 Q6ZRM9 215 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 HSD11B1LQ7Z5J1 315 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 KLHDC8BQ8IXV7 354 aa5.33□□□□□ -1.56
RFC1-201ENST00000349703 SEMA6DQ8NFY4 1073 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms