RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MEF2DQ14814 521 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 RSPO4Q2I0M5 234 aaPredicted RBP16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 NKAIN3Q8N8D7 197 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 ZNF501Q96CX3 271 aaPredicted RBP16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 A0A0A6YYH2 397 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 ANKUB1A6NFN9 424 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 A6NJ64 397 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 LIPT2A6NK58 231 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 NUDT21O43809 227 aaKnown RBP16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 TIAF1O95411 115 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC25A4P12235 298 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 RAB6AP20340 208 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 CNR1P21554 472 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 HSD11B1P28845 292 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 ZNF93P35789 620 aaPredicted RBP16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 ZP4Q12836 540 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 PLAC9Q5JTB6 97 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 DNM1P34Q6PK57 102 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 KLHL24Q6TFL4 600 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 ACOT7LQ6ZUV0 252 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC22A24Q8N4F4 322 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 PTX4Q96A99 478 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 RAB33BQ9H082 229 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 LHFPL6Q9Y693 200 aa16.05■□□□□ 0.16
PTP4A3-202ENST00000349124 TMEM200CA6NKL6 621 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 MPTX1A8MV57 137 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 RER1O15258 196 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 PIAS2O75928 621 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR2F2O95006 317 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 MPIG6BO95866 241 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR3A4PP47883 348 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 EMP2P54851 167 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 SRSF4Q08170 494 aaKnown RBP16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 C17orf67Q0P5P2 114 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR2F1Q13607 317 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 RAB30Q15771 203 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 GLIPR1L1Q6UWM5 242 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC25A45Q8N413 288 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR1S2Q8NGQ3 325 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 FAM71F1Q96KD3 344 aaPredicted RBP16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC2A8Q9NY64 477 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 TSPAN9O75954 239 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 IL2RAP01589 272 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 IFNA6P05013 189 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 PGAM2P15259 253 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 FOSL2P15408 326 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 SERPINF1P36955 418 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 NPY4RP50391 375 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 PPIAP62937 165 aaKnown RBP16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 MYBPHQ13203 477 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 RAB12Q6IQ22 244 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 PLXDC1Q8IUK5 500 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR5D14Q8NGL3 314 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 OR10R2Q8NGX6 335 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 FOXRED1Q96CU9 486 aaPredicted RBP16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 PHB2Q99623 299 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 FREM2Q5SZK8 3169 aa16.04■□□□□ 0.16
PTP4A3-202ENST00000349124 RAD51DO75771 328 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 GP1BAP07359 652 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 RAB3AP20336 220 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 NXPH1P58417 271 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 MICBQ29980 383 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 DEGS2Q6QHC5 323 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 OR4K15Q8NH41 348 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 TMEM41AQ96HV5 264 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC7A5P2Q9GIP4 190 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 LPAR5Q9H1C0 372 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 GAREM1Q9H706 876 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 POLR1DQ9Y2S0 133 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 E9PLN8 166 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 TMEM50BP56557 158 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 PHF19Q5T6S3 580 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ABHD12BQ7Z5M8 362 aaPredicted RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 NAA40Q86UY6 237 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 MAFIPQ8WZ33 124 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ADAT1Q9BUB4 502 aaKnown RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 FAM117AQ9C073 453 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 KLRF1Q9NZS2 232 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 PCDHB10Q9UN67 800 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 OR6C76A6NM76 312 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ADAP1O75689 374 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ZNF17P17021 662 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 APOBEC1P41238 236 aaKnown RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 MC2RQ01718 297 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 SLC9A3R2Q15599 337 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 FAM122CQ6P4D5 195 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 OR5AS1Q8N127 324 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 PLPP5Q8NEB5 264 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 OR5D18Q8NGL1 313 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 THAP6Q8TBB0 222 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 RRNAD1Q96FB5 475 aaKnown RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 MRPL13Q9BYD1 178 aaKnown RBP16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 ASH2LQ9UBL3 628 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 CSAG2Q9Y5P2 127 aa16.03■□□□□ 0.16
PTP4A3-202ENST00000349124 TRBV11-1A0A0K0K1C0 115 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 VSTM2BA6NLU5 285 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 TMEM14DPA8MWL7 114 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 ZNF208O43345 1280 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms