RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 SHPKQ9UHJ6 478 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 VDAC3Q9Y277 283 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 HS3ST3A1Q9Y663 406 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 R4GMQ9 66 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 SPAG17Q6Q759 2223 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 FRG2CA6NGY1 282 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 RAB27BO00194 218 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 TXNL1O43396 289 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 ZBTB25P24278 435 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 SGCAQ16586 387 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 ACOT7LQ6ZUV0 252 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 PAQR4Q8N4S7 273 aaPredicted RBP13.6□□□□□ -0.23
PERM1-201ENST00000341290 MARCH1Q8TCQ1 289 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
PERM1-201ENST00000341290 ZC3H10Q96K80 434 aaKnown RBP13.6□□□□□ -0.23
PERM1-201ENST00000341290 WDR77Q9BQA1 342 aaPredicted RBP13.6□□□□□ -0.23
PERM1-201ENST00000341290 PGCP20142 388 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 ABCD3P28288 659 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 DEFB133Q30KQ1 61 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
PERM1-201ENST00000341290 CCNL2Q96S94 520 aaPredicted RBP13.59□□□□□ -0.23
PERM1-201ENST00000341290 SOX7Q9BT81 388 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 TPSD1Q9BZJ3 242 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 FN3KRPQ9HA64 309 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 OR6C76A6NM76 312 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 H3BML4 177 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 SULT2B1O00204 365 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 SULT1C2O00338 296 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 CD74P04233 296 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 SLC6A8P48029 635 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 POU3F1Q03052 451 aaPredicted RBP13.59□□□□□ -0.23
PERM1-201ENST00000341290 EBPQ15125 230 aaKnown RBP13.59□□□□□ -0.23
PERM1-201ENST00000341290 GFOD2Q3B7J2 385 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 TMEM71Q6P5X7 295 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 TMEM200AQ86VY9 491 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 DCUN1D4Q92564 292 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 KLHDC7BQ96G42 594 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 PHB2Q99623 299 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 CUTCQ9NTM9 273 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
PERM1-201ENST00000341290 ZNF208O43345 1280 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 OR2F2O95006 317 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 HTR3BO95264 441 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 SNAPINO95295 136 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 IFNA4P05014 189 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 H2BFMP0C1H6 154 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 OR2F1Q13607 317 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 C9orf152Q5JTZ5 239 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 AVPI1Q5T686 147 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 LANCL3Q6ZV70 420 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 TMED6Q8WW62 240 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 EDEM2Q9BV94 578 aa13.58□□□□□ -0.23
PERM1-201ENST00000341290 A0A1B0GW55 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 LDLRAD4O15165 306 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 AHSA1O95433 338 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 LY86O95711 162 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 IGKV3-11P04433 115 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 IFNA6P05013 189 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L2P0CJ85 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L3P0CJ86 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L4P0CJ87 422 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L5P0CJ88 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L6P0CJ89 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4L7P0CJ90 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 MYF5P13349 255 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 TDGF1P13385 188 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 SERPINF1P36955 418 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 SSBP1Q04837 148 aaKnown RBP13.58□□□□□ -0.24
PERM1-201ENST00000341290 SLC9A3R2Q15599 337 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 ZNF260Q3ZCT1 412 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 SLC25A42Q86VD7 318 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 ZNF101Q8IZC7 436 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 SPEM1Q8N4L4 309 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 CPNE2Q96FN4 548 aaPredicted RBP13.58□□□□□ -0.24
PERM1-201ENST00000341290 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 VSX1Q9NZR4 365 aaPredicted RBP13.58□□□□□ -0.24
PERM1-201ENST00000341290 DUX4Q9UBX2 424 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 CA14Q9ULX7 337 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 CEP192Q8TEP8 1941 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 PHF3Q92576 2039 aaKnown RBP13.58□□□□□ -0.24
PERM1-201ENST00000341290 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 ADCYAP1P18509 176 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 NFYBP25208 207 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 GABRA4P48169 554 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 NPY4RP50391 375 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
PERM1-201ENST00000341290 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 PRRT1Q99946 306 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 BANF2Q9H503 90 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 OR2S2Q9NQN1 319 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 MKL2Q9ULH7 1088 aa13.58□□□□□ -0.24
PERM1-201ENST00000341290 A0A1W2PP11 408 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms