RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 GPR84Q9NQS5 396 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 MRPS17Q9Y2R5 130 aaKnown RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 PNPP00491 289 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 IL11P20809 199 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 MEF2DQ14814 521 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 ZNF626Q68DY1 528 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 H1FNTQ75WM6 255 aaPredicted RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 SLC16A13Q7RTY0 426 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 RPS10P5Q9NQ39 176 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 A0A1W2PPC4 97 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 A6NIZ1 184 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SNRNP70P08621 437 aaKnown RBP12.59□□□□□ -0.39
SDC2-201ENST00000302190 BTCP35070 178 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 GPR3P46089 330 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 ZP1P60852 638 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 RAP1BP61224 184 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 RAP1AP62834 184 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 H3F3CQ6NXT2 135 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 BRICD5Q6PL45 260 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 MRGPREQ86SM8 312 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 EID2Q8N6I1 236 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SUMF1Q8NBK3 374 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 ADAT1Q9BUB4 502 aaKnown RBP12.59□□□□□ -0.39
SDC2-201ENST00000302190 HIF3AQ9Y2N7 669 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 IGHV3-64DA0A0J9YX35 117 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SCRG1O75711 98 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 IGHG1P01857 330 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 DBHP09172 617 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 FOLR1P15328 257 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 EFNB1P98172 346 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SNTB1Q13884 538 aaKnown RBP12.59□□□□□ -0.39
SDC2-201ENST00000302190 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SLAMF9Q96A28 289 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 CNTNAP3BQ96NU0 1288 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 PRMT8Q9NR22 394 aaPredicted RBP12.59□□□□□ -0.39
SDC2-201ENST00000302190 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 PRR32B1ATL7 298 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 RGS19P49795 217 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 HERV-K104P61576 105 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 FOXF1Q12946 379 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 C2orf68Q2NKX9 166 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 PHLDA2Q53GA4 152 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 P4HA3Q7Z4N8 544 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 MFSD8Q8NHS3 518 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 WWTR1Q9GZV5 400 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 KCNIP3Q9Y2W7 256 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 APC2O95996 2303 aa12.59□□□□□ -0.39
SDC2-201ENST00000302190 A0A0D9SG52 128 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 RER1O15258 196 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 ADAP1O75689 374 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 H2BFSP57053 126 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 ZNF141Q15928 474 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 ATG4DQ86TL0 474 aaPredicted RBP12.58□□□□□ -0.39
SDC2-201ENST00000302190 ZNF485Q8NCK3 441 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 FAM71CQ8NEG0 241 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 SGK3Q96BR1 496 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 TM4SF19Q96DZ7 209 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 KLHDC3Q9BQ90 382 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.39
SDC2-201ENST00000302190 SLC22A11Q9NSA0 550 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 GPR160Q9UJ42 338 aa12.58□□□□□ -0.39
SDC2-201ENST00000302190 TMEM184BQ9Y519 407 aaPredicted RBP12.58□□□□□ -0.39
SDC2-201ENST00000302190 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 IL33O95760 270 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 JMJD7P0C870 316 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 ZNF14P17017 642 aaPredicted RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 GNRHRP30968 328 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 OTX2P32243 289 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 CD96P40200 585 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 SLC26A5P58743 744 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 RPS27AP62979 156 aaKnown RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 UBA52P62987 128 aaKnown RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 EGR3Q06889 387 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 HSD17B11Q8NBQ5 300 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 RGP1Q92546 391 aaPredicted RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 TXNL1O43396 289 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 WNT11O96014 354 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 GUSBP08236 651 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 RAB13P51153 203 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 MTCP1P56278 107 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 C17orf67Q0P5P2 114 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 IAH1Q2TAA2 248 aaPredicted RBP12.58□□□□□ -0.4
SDC2-201ENST00000302190 Q3ZCU0 254 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 GPBAR1Q8TDU6 330 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 C11orf40Q8WZ69 217 aa12.58□□□□□ -0.4
SDC2-201ENST00000302190 MFSD2BA6NFX1 497 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 ANGPTL7O43827 346 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 ZNF217O75362 1048 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms