RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MMP16P51512 607 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 RAP1BP61224 184 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 RAP1AP62834 184 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 QRFPP83859 136 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 SLC9A3R2Q15599 337 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 D2HGDHQ8N465 521 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 NKAIN3Q8N8D7 197 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 OR1S2Q8NGQ3 325 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ZNF501Q96CX3 271 aaPredicted RBP21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ASF1BQ9NVP2 202 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 RALGAPA1Q6GYQ0 2036 aa21.64■■□□□ 1.06
SPTSSA-201ENST00000298130 PGAM2P15259 253 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 SFTPDP35247 375 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 SERPINF1P36955 418 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 MC2RQ01718 297 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 FGL1Q08830 312 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 MYBPHQ13203 477 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 MEF2DQ14814 521 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 SLC22A24Q8N4F4 322 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 B3GAT1Q9P2W7 334 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 ASH2LQ9UBL3 628 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 CYB5R1Q9UHQ9 305 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 SULT2B1O00204 365 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 BET1O15155 118 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 EFSO43281 561 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 PIAS2O75928 621 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 RAB3AP20336 220 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 SDK2Q58EX2 2172 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 PLXDC1Q8IUK5 500 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 PHB2Q99623 299 aa21.64■■□□□ 1.05
SPTSSA-201ENST00000298130 TRBV11-1A0A0K0K1C0 115 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 TOR1AO14656 332 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 ADAP1O75689 374 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 SNAPC5O75971 98 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 CD37P11049 281 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 HSD11B1P28845 292 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 PLAC9Q5JTB6 97 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 OR4K15Q8NH41 348 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 MFSD8Q8NHS3 518 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 THAP6Q8TBB0 222 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 MITD1Q8WV92 249 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 LHFPL6Q9Y693 200 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 ANKUB1A6NFN9 424 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 DUX1O43812 170 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 CNR1P21554 472 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 PCK2Q16822 640 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 OGFOD3Q6PK18 319 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 ACOT7LQ6ZUV0 252 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 SLC25A45Q8N413 288 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 OR10R2Q8NGX6 335 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 CSAG2Q9Y5P2 127 aa21.63■■□□□ 1.05
SPTSSA-201ENST00000298130 LIPT2A6NK58 231 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 VSTM2BA6NLU5 285 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 GIMD1P0DJR0 217 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 ZNF20P17024 532 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 C17orf67Q0P5P2 114 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 MICBQ29980 383 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 MOB3CQ70IA8 216 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 NAA40Q86UY6 237 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 OR5D14Q8NGL3 314 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 PCDHB10Q9UN67 800 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 CELSR3Q9NYQ7 3312 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 A0A0B4J2A0 478 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 RAD51DO75771 328 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 HTR3BO95264 441 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 CTRB1P17538 263 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 PPIAP62937 165 aaKnown RBP21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 SNTB1Q13884 538 aaKnown RBP21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 CTRB2Q6GPI1 263 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 OR10G3Q8NGC4 313 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 GAREM1Q9H706 876 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 SHPKQ9UHJ6 478 aa21.62■■□□□ 1.05
SPTSSA-201ENST00000298130 DNASE2O00115 360 aaPredicted RBP21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 SDCBPO00560 298 aaPredicted RBP21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 OR2F2O95006 317 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 NXPH1P58417 271 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 CLRN1P58418 232 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 OR2F1Q13607 317 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 TMEM200AQ86VY9 491 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 INO80EQ8NBZ0 244 aaPredicted RBP21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 DCUN1D4Q92564 292 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 EDAQ92838 391 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 DDIT4LQ96D03 193 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 GPR84Q9NQS5 396 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 E9PLN8 166 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 RAB6AP20340 208 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 IGFBP4P22692 258 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 RAB12Q6IQ22 244 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 TMEM88Q6PEY1 159 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 OR5B2Q96R09 309 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 LPAR5Q9H1C0 372 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 LHX6Q9UPM6 363 aa21.61■■□□□ 1.05
SPTSSA-201ENST00000298130 TMEM200CA6NKL6 621 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 ZNF208O43345 1280 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 NUDT21O43809 227 aaKnown RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 HEXBP07686 556 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 HCKP08631 526 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 ZNF121P58317 390 aaPredicted RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 OR8B12Q8NGG6 310 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms