RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 METTL21AQ8WXB1 218 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 CDC6Q99741 560 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 SLC6A7Q99884 636 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 FOXQ1Q9C009 403 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 KCNK15Q9H427 330 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 GHRLQ9UBU3 117 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 HHLA2Q9UM44 414 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 VSIG4Q9Y279 399 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 FARSAQ9Y285 508 aaKnown RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 FAM96BQ9Y3D0 163 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CSAG2Q9Y5P2 127 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PMS2P1A4D2B8 440 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RNASEK-C17orf49H0YIS7 233 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 DDAH2O95865 285 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 ARRB1P49407 418 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 BLKP51451 505 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 MFGE8Q08431 387 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 ACKR1Q16570 336 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 CORO6Q6QEF8 472 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ZNF563Q8TA94 476 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 TMEM41AQ96HV5 264 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 SPOCK3Q9BQ16 436 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 NUDT9Q9BW91 350 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RAB33BQ9H082 229 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 CHRDQ9H2X0 955 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RAB22AQ9UL26 194 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ANAPC10Q9UM13 185 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 LRP12Q9Y561 859 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 TPRP12270 2363 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 A0A0B4J2A0 478 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 A6NIZ1 184 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 EEF1E1-BLOC1S5C9J1V9 151 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 PDGFBP01127 241 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 CELA2BP08218 269 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 LIPCP11150 499 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RAP1BP61224 184 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 SSTP61278 116 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RAP1AP62834 184 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ADAM8P78325 824 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 KIAA0895LQ68EN5 471 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 AWAT2Q6E213 333 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 OR10K2Q6IF99 312 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 GATSQ8NAP1 163 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 TCTEX1D2Q8WW35 142 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ZC3H10Q96K80 434 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 ABHD6Q9BV23 337 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 PAPOLGQ9BWT3 736 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 CST11Q9H112 138 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 HRH4Q9H3N8 390 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 G6PC2Q9NQR9 355 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 TAS2R4Q9NYW5 299 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 ASH2LQ9UBL3 628 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 PISDQ9UG56 409 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 SHPKQ9UHJ6 478 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 SLC22A13Q9Y226 551 aa9.26□□□□□ -0.93
SKA1-201ENST00000285116 RPH3AQ9Y2J0 694 aaPredicted RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 MRPS18BQ9Y676 258 aaKnown RBP9.26□□□□□ -0.93
SKA1-201ENST00000285116 A8MVM7 634 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 PLPP3O14495 311 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 GP1BBP13224 206 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF28P17035 718 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CD1CP29017 333 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 AVPR2P30518 371 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 PMELP40967 661 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CCR4P51679 360 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 F2RL1P55085 397 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 STARD6P59095 220 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CYCSP99999 105 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 TDGQ13569 410 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 KCNAB1Q14722 419 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 RAB30Q15771 203 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 ZNF260Q3ZCT1 412 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 GLYATL3Q5SZD4 288 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 TMEM164Q5U3C3 297 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 TMEM244Q5VVB8 128 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 PAPD4Q6PIY7 484 aaKnown RBP9.25□□□□□ -0.93
SKA1-201ENST00000285116 TMEM92Q6UXU6 159 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 SFTPA2Q8IWL1 248 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 DTWD2Q8NBA8 298 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 SMIM8Q96KF7 97 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 CLCC1Q96S66 551 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 MICU1Q9BPX6 476 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 KLK13Q9UKR3 277 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 PCDHGA1Q9Y5H4 931 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 WIF1Q9Y5W5 379 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 H3BMH7 237 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 MFNGO00587 321 aa9.25□□□□□ -0.93
SKA1-201ENST00000285116 GABRG2P18507 467 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms