RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 STT3BQ8TCJ2 826 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 RXFP4Q8TDU9 374 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 RAB39BQ96DA2 213 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 SUCNR1Q9BXA5 334 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 A0A087WUJ7 227 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CYB5BO43169 146 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 SEMG1P04279 462 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 SRYQ05066 204 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 DUSP2Q05923 314 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 KLF9Q13886 244 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-201ENST00000267199 WDR38Q5JTN6 314 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 C9orf135Q5VTT2 229 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 OR5M8Q8NGP6 311 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CCDC74AQ96AQ1 378 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 KIRREL1Q96J84 757 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 ULBP2Q9BZM5 246 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 AK3Q9UIJ7 227 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 LINC01565O15544 149 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 SCRG1O75711 98 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 SYNGR4O95473 234 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 MPC2O95563 127 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 TMIGD3P0DMS9 266 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CD96P40200 585 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 ASCL1P50553 236 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 EEF1A1P68104 462 aaKnown RBP10.42□□□□□ -0.74
VPS33A-201ENST00000267199 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 LCN15Q6UWW0 184 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 SGK3Q96BR1 496 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF764Q96H86 408 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-201ENST00000267199 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 MED9Q9NWA0 146 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 GNG13Q9P2W3 67 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 PRAMEF25A6NGN4 478 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 ADAM10O14672 748 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 IGHA1P01876 353 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 HBE1P02100 147 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CT62P0C5K7 136 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CLDN17P56750 224 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 GABREP78334 506 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 PRSS53Q2L4Q9 553 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 PPP1R3BQ86XI6 285 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 OR5AP2Q8NGF4 316 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 FBXO17Q96EF6 278 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 CCNL2Q96S94 520 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-201ENST00000267199 ABHD6Q9BV23 337 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 FKRPQ9H9S5 495 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 PRR13Q9NZ81 148 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
VPS33A-201ENST00000267199 G3V3Y1 287 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 CRYBA1P05813 215 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SPP1P10451 314 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 DUSP3P51452 185 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 MFAP5Q13361 173 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 MIDNQ504T8 468 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 NCMAPQ5T1S8 102 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF770Q6IQ21 691 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 NPSR1Q6W5P4 371 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 H1FNTQ75WM6 255 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 LGI3Q8N145 548 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 GVQW1Q8N7I0 195 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 WNT2BQ93097 391 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 LIN37Q96GY3 246 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 C2orf50Q96LR7 162 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 CHST6Q9GZX3 395 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 MAGT1Q9H0U3 335 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 PRO1933Q9H354 126 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 PADI1Q9ULC6 663 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 TAAR5O14804 337 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 BCAT2O15382 392 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 GPR137BO60478 399 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ARG1P05089 322 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 CPN1P15169 458 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 FOSL1P15407 271 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ELLP55199 621 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 EMC4Q5J8M3 183 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 MISPQ8IVT2 679 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 EXD3Q8N9H8 876 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SLC39A9Q9NUM3 307 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SVILO95425 2214 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 A0A0B4J293 547 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF587BE7ETH6 402 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ADAP1O75689 374 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 DPP4P27487 766 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 CNN3Q15417 329 aaKnown RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 C9orf50Q5SZB4 431 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 RNLSQ5VYX0 342 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 C1orf87Q8N0U7 546 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM229BQ8NBD8 167 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 OR1J1Q8NGS3 322 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SLAMF6Q96DU3 332 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SERTAD4Q9NUC0 356 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 KCNAB3O43448 404 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 MSX1P28360 303 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms