RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SFTPA1Q8IWL2 248 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 COMMD1Q8N668 190 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 ELSPBP1Q96BH3 223 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 RASD2Q96D21 266 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 SCARF2Q96GP6 870 aaPredicted RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 OR2A5Q96R48 311 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 LMF2Q9BU23 707 aaKnown RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 PARP12Q9H0J9 701 aaKnown RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 METTL9Q9H1A3 318 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 PDE7BQ9NP56 450 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 ZNF346Q9UL40 294 aaKnown RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 TMED3Q9Y3Q3 217 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 LDB3O75112 727 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 ABHD16AO95870 558 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 CST4P01036 141 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 NR2C1P13056 603 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 GJA4P35212 333 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 LTBRP36941 435 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 RPS21P63220 83 aaKnown RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 SGCGQ13326 291 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 CST6Q15828 149 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 MESTQ5EB52 335 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST2H3PS2Q5TEC6 136 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 ZNF385CQ66K41 422 aaPredicted RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 ZCCHC10Q8TBK6 192 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 SLC25A43Q8WUT9 341 aaPredicted RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 FGF14Q92915 247 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 CTHRC1Q96CG8 243 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 POM121Q96HA1 1249 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 TWSG1Q9GZX9 223 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 LATO43561 262 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BKO60814 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 MBP02144 154 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BJP06899 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 FABP4P15090 132 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 RAB4AP20338 218 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BOP23527 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 CCKBRP32239 447 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BBP33778 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BDP58876 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 RPS4XP62701 263 aaKnown RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BCP62807 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 NKX6-1P78426 367 aaPredicted RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 ZNF141Q15928 474 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST2H2BEQ16778 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 FBXO42Q6P3S6 717 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 PARM1Q6UWI2 310 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 MAMDC2Q7Z304 686 aaPredicted RBP11.74□□□□□ -0.53
NUP54-201ENST00000264883 OR10AD1Q8NGE0 317 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BHQ93079 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 NTNG2Q96CW9 530 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 MUCL1Q96DR8 90 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 PTCHD1Q96NR3 888 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BNQ99877 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 HIST1H2BMQ99879 126 aa11.74□□□□□ -0.53
NUP54-201ENST00000264883 A0A087WUJ7 227 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 FGF17O60258 216 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 SFTPBP07988 381 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
NUP54-201ENST00000264883 HTR2CP28335 458 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 TAS2R31P59538 309 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 TNFRSF9Q07011 255 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 MGAT2Q10469 447 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 ZNF440Q8IYI8 595 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 PRSS35Q8N3Z0 413 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 OR9K2Q8NGE7 335 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 OR5R1Q8NH85 324 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 RNF128Q8TEB7 428 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 KXD1Q9BQD3 176 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 SRMSQ9H3Y6 488 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 SLC2A4RGQ9NR83 387 aa11.73□□□□□ -0.53
NUP54-201ENST00000264883 ZNF724A8MTY0 619 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 A8MWP6 167 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 NME2P1O60361 137 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 PTBP3O95758 552 aaKnown RBP11.72□□□□□ -0.53
NUP54-201ENST00000264883 PET100P0DJ07 73 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RASGEF1BQ0VAM2 473 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RAB32Q13637 225 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 UBE2V2Q15819 145 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 LEG1Q6P5S2 330 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 TRAPPC6BQ86SZ2 158 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 FJX1Q86VR8 437 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RPP25Q9BUL9 199 aaKnown RBP11.72□□□□□ -0.53
NUP54-201ENST00000264883 SLC35B3Q9H1N7 401 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RAB18Q9NP72 206 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 SPTBN5Q9NRC6 3674 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms