RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ZNF32P17041 273 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 ACP1P24666 158 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 RAB11AP62491 216 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 SPCS2Q15005 226 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 GABRG1Q8N1C3 465 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 SULT4A1Q9BR01 284 aa12.48□□□□□ -0.41
CDH1-201ENST00000261769 UNKLQ9H9P5 680 aaKnown RBP12.48□□□□□ -0.41
CDH1-201ENST00000261769 PLPP3O14495 311 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 ERGP11308 486 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 HTR2AP28223 471 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 ZCCHC14Q8WYQ9 949 aaKnown RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 RAB1CQ92928 201 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 MBOAT4Q96T53 435 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 SHARPINQ9H0F6 387 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 A0A1W2PQM1 296 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 MASP2O00187 686 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 LIFP15018 202 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 MICBQ29980 383 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 RSPO4Q2I0M5 234 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 RNLSQ5VYX0 342 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 LACC1Q8IV20 430 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 TM4SF19Q96DZ7 209 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 SLC25A21Q9BQT8 299 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 DEFA4P12838 97 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 ZNF17P17021 662 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 JUNBP17275 347 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 CD96P40200 585 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 RRAS2P62070 204 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 CTU2Q2VPK5 515 aaKnown RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 ADAT1Q9BUB4 502 aaKnown RBP12.47□□□□□ -0.41
CDH1-201ENST00000261769 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
CDH1-201ENST00000261769 ASPDHA6ND91 283 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 IFNA10P01566 189 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 KITLGP21583 273 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 RHEBQ15382 184 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
CDH1-201ENST00000261769 ING1Q9UK53 422 aaPredicted RBP12.46□□□□□ -0.41
CDH1-201ENST00000261769 HLA-HP01893 362 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 CSRP1P21291 193 aaKnown RBP12.46□□□□□ -0.41
CDH1-201ENST00000261769 ACSM1Q08AH1 577 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 SFRP5Q5T4F7 317 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 SLC38A9Q8NBW4 561 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 OR10K1Q8NGX5 313 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 DNAJC13O75165 2243 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 CDX4O14627 284 aaPredicted RBP12.46□□□□□ -0.41
CDH1-201ENST00000261769 GABARAPO95166 117 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 RAB13P51153 203 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
CDH1-201ENST00000261769 RDH10Q8IZV5 341 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 DUSP21Q9H596 190 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 TAS2R3Q9NYW6 316 aa12.46□□□□□ -0.41
CDH1-201ENST00000261769 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 GABARAPH6UMI1 98 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 IGHA2P01877 340 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 LIPAP38571 399 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 SUB1P53999 127 aaKnown RBP eCLIP12.46□□□□□ -0.42
CDH1-201ENST00000261769 STEAP3Q658P3 488 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 C9orf40Q8IXQ3 194 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 SEH1LQ96EE3 360 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 ZMAT3Q9HA38 289 aaKnown RBP12.46□□□□□ -0.42
CDH1-201ENST00000261769 HEYLQ9NQ87 328 aaPredicted RBP12.46□□□□□ -0.42
CDH1-201ENST00000261769 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.42
CDH1-201ENST00000261769 C16orf97H3BN30 126 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 PPIHO43447 177 aaKnown RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 TMEM127O75204 238 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 FABP1P07148 127 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 CPEP16870 476 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 ATF1P18846 271 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 CSF2RBP32927 897 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 DBPQ10586 325 aaPredicted RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 CD226Q15762 336 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 LGI3Q8N145 548 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 OR2M3Q8NG83 312 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 GCM1Q9NP62 436 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 OSGIN2Q9Y236 505 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 A3GALT2U3KPV4 340 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 SIPA1L1O43166 1804 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 LIPT2A6NK58 231 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 AQP7P3A6NL99 342 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 MSTNO14793 375 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 TSPAN9O75954 239 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms