RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 VSIG10L2P0DP72 767 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 MC2RQ01718 297 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 ZFP36L1Q07352 338 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF273Q14593 569 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RNF144BQ7Z419 303 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 CYYR1Q96J86 154 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 SHARPINQ9H0F6 387 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 KIF25Q9UIL4 384 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 DCHS1Q96JQ0 3298 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 CEP295Q9C0D2 2601 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 A0A1B0GUH1 482 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 A6NIZ1 184 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 CCSO14618 274 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RP2O75695 350 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 GDF1P27539 372 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 S100A11P31949 105 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 MNDAP41218 407 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RAG2P55895 527 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RAP1BP61224 184 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RAP1AP62834 184 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 C6orf15Q6UXA7 325 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 BATF2Q8N1L9 274 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RNF128Q8TEB7 428 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 ASB5Q8WWX0 329 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM3DQ96BQ1 224 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 RLN2P04090 185 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 DLSTP36957 453 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 RAB11BQ15907 218 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF101Q8IZC7 436 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 BEST3Q8N1M1 668 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 SLC25A28Q96A46 364 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 SEC22AQ96IW7 307 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 GPER1Q99527 375 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 GDF2Q9UK05 429 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 NXT1Q9UKK6 140 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 HHLA2Q9UM44 414 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 ACACAQ13085 2346 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 ICE1Q9Y2F5 2266 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 GABARAPH6UMI1 98 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 GSTZ1O43708 216 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 IL32P24001 234 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 TAS2R20P59543 309 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 Q0VFX4 171 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 NKPD1Q17RQ9 610 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 AKIRIN2Q53H80 203 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 IMMP1LQ96LU5 166 aa12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 ALKBH3Q96Q83 286 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-201ENST00000257604 C5orf63A6NC05 138 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 CXCL13O43927 109 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 IKZF1Q13422 519 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 SEZ6L2Q6UXD5 910 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 STRADBQ9C0K7 418 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 YKT6O15498 198 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF254O75437 659 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 DBHP09172 617 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 GTF2F2P13984 249 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 CCNOP22674 350 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 TMPPEQ6ZT21 453 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 UQCC2Q9BRT2 126 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 C1orf198Q9H425 327 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 FOXJ3Q9UPW0 622 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 OR5H15A6NDH6 313 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 SCGB2B2Q4G0G5 96 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 STEAP1Q9UHE8 339 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
TRAFD1-201ENST00000257604 A0A0J9YW62 118 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 PHYHO14832 338 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 BET1O15155 118 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 CALCBP10092 127 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 HOXA6P31267 233 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 CSNK1A1P48729 337 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 EXT1Q16394 746 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 C3AR1Q16581 482 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 ACER2Q5QJU3 275 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF626Q68DY1 528 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 TEX19Q8NA77 164 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 LIN37Q96GY3 246 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 M0QYG6 137 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 PRAF2O60831 178 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 F12P00748 615 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 MSX1P28360 303 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 RAP2BP61225 183 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms