RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 GALR1P47211 349 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 BANF2Q9H503 90 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 HMGA2P52926 109 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 USP53Q70EK8 1073 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 GLCCI1Q86VQ1 547 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 NECAP1Q8NC96 275 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ARSGQ96EG1 525 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
APOB-201ENST00000233242 ANKRD61A6NGH8 418 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 DVL1O14640 695 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 MUC20Q8N307 709 aaPredicted RBP7.47□□□□□ -1.21
APOB-201ENST00000233242 KIR3DX1Q9H7L2 352 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 FBXO34Q9NWN3 711 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 KCND3Q9UK17 655 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 MED16Q9Y2X0 877 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ZNF732B4DXR9 585 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 C1orf61Q13536 156 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 HSD17B8Q92506 261 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 CHRNB4P30926 498 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 LIM2P55344 173 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 DUSP5Q16690 384 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 OVCH2Q7RTZ1 564 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 GPR32P1Q8NGA4 272 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 CDCA3Q99618 268 aaPredicted RBP7.47□□□□□ -1.21
APOB-201ENST00000233242 IGHEP01854 428 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 WNT1P04628 370 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 OR51F2Q8NH61 342 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 OR51H1Q8NH63 302 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ZNRF4Q8WWF5 429 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 TXNIPQ9H3M7 391 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 GABRQQ9UN88 632 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 SMCHD1A6NHR9 2005 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
APOB-201ENST00000233242 OR5M9Q8NGP3 310 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ST8SIA1Q92185 356 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 APH1AQ96BI3 265 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 DSCR3O14972 297 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 PTGER1P34995 402 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 ABI3BPQ7Z7G0 1075 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 NAT6Q93015 286 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 MMP24Q9Y5R2 645 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 SIGLEC1Q9BZZ2 1709 aa7.47□□□□□ -1.21
APOB-201ENST00000233242 EN2P19622 333 aaPredicted RBP7.46□□□□□ -1.21
APOB-201ENST00000233242 SLC25A30Q5SVS4 291 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 RHNO1Q9BSD3 238 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 PLA2G12AQ9BZM1 189 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 PITPNC1Q9UKF7 332 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 COA3Q9Y2R0 106 aaPredicted RBP7.46□□□□□ -1.21
APOB-201ENST00000233242 CTBSQ01459 385 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 ZNF761Q86XN6 746 aaPredicted RBP7.46□□□□□ -1.21
APOB-201ENST00000233242 PIK3IP1Q96FE7 263 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 DERL3Q96Q80 235 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 CDRT15L2A8MXV6 281 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 CTDSPLO15194 276 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 ATF1P18846 271 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 RABEPKQ7Z6M1 372 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 RGPD1P0DJD0 1748 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 Q7L0L9 218 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 CCDC74BQ96LY2 380 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 LINC00052Q96N35 136 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 Q9N2K0 584 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 PLEKHB1Q9UF11 243 aaPredicted RBP7.46□□□□□ -1.21
APOB-201ENST00000233242 hCG_1809904A0A1W2PP81 198 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 A0A1W2PPE2 198 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 A0A1W2PR64 198 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 A0A1W2PRV1 198 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 RPLP1P05386 114 aaKnown RBP7.46□□□□□ -1.21
APOB-201ENST00000233242 SBK3P0C264 359 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 ENPP1P22413 925 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 BTG2P78543 158 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 SSX1Q16384 188 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 LRRC18Q8N456 261 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 POLDIP2Q9Y2S7 368 aa7.46□□□□□ -1.21
APOB-201ENST00000233242 TBX19O60806 448 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 SNCGO76070 127 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 QDPRP09417 244 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 CEBPEQ15744 281 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 PLA1AQ53H76 456 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 OR52B4Q8NGK2 314 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 CMBLQ96DG6 245 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 GPR87Q9BY21 358 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 ZIC2O95409 532 aaPredicted RBP7.46□□□□□ -1.22
APOB-201ENST00000233242 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.22
APOB-201ENST00000233242 HSD17B6O14756 317 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 ZNF749O43361 778 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 MBPP02686 304 aaPredicted RBP7.46□□□□□ -1.22
APOB-201ENST00000233242 PMS2P11Q13670 270 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 SPANXN5Q5MJ07 72 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 KLF15Q9UIH9 416 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 TRBV5-4A0A0C4DH59 114 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 SHHQ15465 462 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 ZNF573Q86YE8 665 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 OR4S1Q8NGB4 309 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 PP6455Q8WZ26 134 aa7.46□□□□□ -1.22
APOB-201ENST00000233242 PIGTQ969N2 578 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms