RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 RAB6AP20340 208 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 BCKDHBP21953 392 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 IL12BP29460 328 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 PPM1FP49593 454 aaPredicted RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 ANKRD55Q3KP44 614 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 TTLL10Q6ZVT0 673 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 ANGPTL5Q86XS5 388 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 OR4K15Q8NH41 348 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 GLYATL2Q8WU03 294 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 ARL11Q969Q4 196 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 OR10C1Q96KK4 312 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 DHCR7Q9UBM7 475 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 SPTY2D1-AS1A0A0U1RR47 76 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 TCRBV21S2A2A0A5A6 115 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 AGPAT2O15120 278 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 MT-ATP6P00846 226 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 IFNA6P05013 189 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 RCC1P18754 421 aaPredicted RBP11.02□□□□□ -0.65
NUP88-201ENST00000225696 SLC6A8P48029 635 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 SLC26A5P58743 744 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 PDZK1IP1Q13113 114 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 RBM39Q14498 530 aaKnown RBP11.02□□□□□ -0.65
NUP88-201ENST00000225696 EBPQ15125 230 aaKnown RBP11.02□□□□□ -0.65
NUP88-201ENST00000225696 CLEC18BQ6UXF7 455 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 TGM7Q96PF1 710 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 EMC6Q9BV81 110 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 TBL1XR1Q9BZK7 514 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 BANF2Q9H503 90 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 FAM206AQ9NX38 181 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 SOHLH2Q9NX45 425 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.65
NUP88-201ENST00000225696 A8MVM7 634 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ALG1L2C9J202 215 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 FTCDNL1E5RQL4 147 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 TSPAN2O60636 221 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SEMA4FO95754 770 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 THEGLP0DJG4 465 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ZNF823P16415 610 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ABOP16442 354 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 GABRG2P18507 467 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 AKR1C3P42330 323 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 FAHD2BQ6P2I3 314 aaPredicted RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 ZNF585AQ6P3V2 769 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 DRAM2Q6UX65 266 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 OR1M1Q8NGA1 313 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 FAHD2AQ96GK7 314 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 TCTN2Q96GX1 697 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 LRRC61Q9BV99 259 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 NMES1Q9C002 83 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 EPOPA6NHQ4 379 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 OR5K4A6NMS3 321 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SHISA8B8ZZ34 492 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ADAM10O14672 748 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ZNF354AO60765 605 aaPredicted RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 GLAP06280 429 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 H2BFMP0C1H6 154 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SLC2A1P11166 492 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 PGCP20142 388 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ABCD3P28288 659 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 CRABP1P29762 137 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 LPAR6P43657 344 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 RABIFP47224 123 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 POLR2HP52434 150 aaKnown RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 TMEM50BP56557 158 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 CLDN6P56747 220 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 PLCXD2Q0VAA5 305 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ELAVL1Q15717 326 aaKnown RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 AWAT2Q6E213 333 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 PGAP1Q75T13 922 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SPAG16Q8N0X2 631 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 NKAIN3Q8N8D7 197 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 TERB2Q8NHR7 220 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 MAFIPQ8WZ33 124 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 ZNF285Q96NJ3 590 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 NRIP2Q9BQI9 281 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 LPAR5Q9H1C0 372 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 RHOFQ9HBH0 211 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 PDE7BQ9NP56 450 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 MMP26Q9NRE1 261 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 RCC2Q9P258 522 aaKnown RBP11.01□□□□□ -0.65
NUP88-201ENST00000225696 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
NUP88-201ENST00000225696 SDCBPO00560 298 aaPredicted RBP11□□□□□ -0.65
NUP88-201ENST00000225696 SYT7O43581 403 aa11□□□□□ -0.65
NUP88-201ENST00000225696 MEOX2P50222 304 aa11□□□□□ -0.65
NUP88-201ENST00000225696 EMP2P54851 167 aa11□□□□□ -0.65
NUP88-201ENST00000225696 PJVKQ0ZLH3 352 aa11□□□□□ -0.65
NUP88-201ENST00000225696 RAB32Q13637 225 aa11□□□□□ -0.65
NUP88-201ENST00000225696 PCK2Q16822 640 aa11□□□□□ -0.65
NUP88-201ENST00000225696 TMEM244Q5VVB8 128 aa11□□□□□ -0.65
NUP88-201ENST00000225696 ZNF704Q6ZNC4 412 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms