RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm4141K9J7H2 306 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Psmb1O09061 240 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 CideaO70302 217 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 CapgP24452 352 aaKnown RBP11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gbx1P82976 418 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 EngQ63961 653 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Agfg2Q80WC7 479 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Znf775Q8BI73 538 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tsen54Q8C2A2 525 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pars2Q8CFI5 475 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Uqcr10Q8R1I1 64 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dnaja3Q99M87 480 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mfsd4b2Q9D8I5 366 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 SvaE9PX96 165 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r31L7N2F1 303 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm26965M0QWH4 86 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tfap2eQ6VUP9 442 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1357Q7TQU7 313 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ankrd46Q8BTZ5 228 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp87Q8K2A4 540 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cyb5r1Q9DB73 305 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sphk2Q9JIA7 617 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp820E9Q5G8 549 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pcdh12O55134 1180 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adam9Q61072 845 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sohlh1Q6IUP1 357 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 C130073F10RikQ8C4L8 201 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1491Q8VEZ5 319 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc19a3Q99PL8 488 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Acer3Q9D099 267 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm9817Q9D2M0 144 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Qtrt1Q9JMA2 403 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cdc7Q9Z0H0 564 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mptx2D3YYJ7 219 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 H3f3cP02301 136 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 RrasP10833 218 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 H3f3aP84244 136 aaKnown RBP10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adamts1P97857 968 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr641Q8VGX6 312 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Snapc3Q9D2C9 407 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 CalyQ9DCA7 226 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Susd5G3UW60 619 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dtd2Q8BHA3 168 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Elfn1Q8C8T7 828 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Trib3Q8K4K2 354 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr794Q8VF26 320 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr96Q8VFE3 313 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr99Q8VFE4 305 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Csnk1dQ9DC28 415 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nubp2Q9R061 275 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tcstv3O70518 169 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 ClppO88696 272 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Uck1P52623 277 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Arrdc5Q497K5 325 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Smug1Q6P5C5 279 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fbxo22Q78JE5 402 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp455Q7M6X9 461 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr335-psQ7TRY6 312 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Prdx6bQ8BG37 224 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hsd17b13Q8VCR2 304 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1389Q8VGX0 311 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nt5dc2Q91X76 390 aaKnown RBP10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tcf19Q99KJ5 263 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q9CRC3 126 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Prss1Q9Z1R9 246 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp831A2ADM8 1628 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rhox7bA6PW38 321 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pim1P06803 397 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Foxa1P35582 468 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 S100a3P62818 101 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1211Q7TR09 311 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1111Q7TR55 312 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Scgb2b27Q8R1E9 112 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fbxo8Q9QZN3 319 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Bcl6P41183 707 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 MidnQ3TPJ7 465 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc36a3Q811P0 477 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Metap1Q8BP48 386 aaKnown RBP10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mblac1Q8BWY4 260 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 AspaQ8R3P0 312 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 SmoxQ99K82 555 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q9CQT6 229 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sftpa1P35242 248 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Btg1P62325 171 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gpr26Q8BZA7 337 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gykl1Q8C635 549 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Reep4Q8K072 257 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rnf113a1Q8R3P8 341 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Atoh8Q99NA2 322 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Necap1Q9CR95 275 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmem225Q9D9S2 230 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1205A2ATJ7 307 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm5113Q3UGK8 141 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 MthfsdQ3URQ7 372 aaKnown RBP10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Itgb2lQ3UV74 738 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc22a14Q497L9 629 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr512Q8VFZ4 326 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ddb2Q99J79 432 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mllt1Q9ERL0 547 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hapln1Q9QUP5 356 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 70.1 ms