RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Vmn1r143E9PUW9 307 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r16E9Q025 850 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm6465F7A7Y6 181 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r135K9J7G0 307 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r125L7N227 307 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r116L7N2A6 307 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ndufb11O09111 151 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Six5P70178 719 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Scamp1Q8K021 338 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rcc1Q8VE37 421 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Otub2Q9CQX0 234 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tmem208Q9CR96 173 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tspan4Q9DCK3 238 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r100Q9EPS5 307 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cfap54Q8C6S9 3106 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Igkv6-29A0A0G2JEI6 115 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm10428J3QNV7 132 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Wsb1O54927 421 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rpl18P35980 188 aaKnown RBP15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 ActbP60710 375 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Actg1P63260 375 aaKnown RBP15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 EbpP70245 230 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nr0b1Q61066 472 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tgoln1Q62313 353 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Pced1aQ6P1Z5 449 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 ApoolQ78IK4 265 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr851Q7TRG0 312 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 NagpaQ8BJ48 517 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cdhr3Q8BL00 831 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Slc43a1Q8BSM7 564 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1279Q8VF38 313 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1238Q8VG59 315 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Eva1aQ91WM6 156 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tssk4Q9D411 328 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Sec61a2Q9JLR1 476 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tox2A2A472 547 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr727A2RTN7 324 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Btbd8D3YUB6 377 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Zfp160E9Q459 650 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Dok2O70469 412 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gpd1P13707 349 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Kcng3P59053 433 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 SnrpeP62305 92 aaKnown RBP15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm10750Q3V0I0 133 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1026Q7TR90 307 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Lhfpl6Q8BM86 200 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nudt9Q8BVU5 350 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1423Q8VFV0 310 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr584Q8VGW0 319 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Il24Q925S4 181 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Spaca7Q9D2S4 182 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mptx2D3YYJ7 219 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r68E9Q0V3 319 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Irs3O54718 495 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tnfaip1O70479 316 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 FahP35505 419 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 TrmoQ562D6 431 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Lrrc52Q5M8M9 314 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 SprQ64105 261 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mvb12aQ78HU3 271 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1501Q8VFQ3 315 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 TpbpbQ9CQC0 121 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cmtm8Q9CZR4 173 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ca13Q9D6N1 262 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 TsnaxQ9QZE7 290 aaKnown RBP15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 MpdzQ8VBX6 2055 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 9930021J03RikH3BKP8 2027 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Il6P08505 211 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 SgcgP82348 291 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nudt18Q3U2V3 323 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Prss43Q76HL1 382 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ap5m1Q8BJ63 490 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cd177Q8R2S8 817 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1132Q8VG97 308 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mat1aQ91X83 396 aaKnown RBP15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Q9CWB7 115 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Dazap2Q9DCP9 168 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nkx2-4Q9EQM3 354 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gal3st1Q9JHE4 423 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gab1Q9QYY0 695 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 MeltfQ9R0R1 738 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr122W4VSP0 330 aa15.19■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r124D3YTX4 307 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Wdr25E9Q349 535 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Clec10aP49300 304 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gnb5P62881 395 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Lrfn4Q80XU8 636 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Fam221aQ8C790 301 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rpp25Q91WE3 199 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Yipf7Q9JIM5 254 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Igkv16-104A0A0B4J1I1 116 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm29797A0A140LIA7 188 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm15130F6PYN5 206 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r120K7N6J6 305 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ifitm5O88728 134 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nme1P15532 152 aaKnown RBP15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 S100gP97816 79 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gls2Q571F8 602 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Sec22aQ8BH47 307 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tmprss11gQ8BZ10 417 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms