RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 NTMQ9P121 344 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 FBXO4Q9UKT5 387 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 CLEC4EQ9ULY5 219 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 WIPI2Q9Y4P8 454 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 A0A1B0GTL3 188 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 A0A1W2PPV4 95 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 RBFOX3A6NFN3 312 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR6C76A6NM76 312 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 FAM171A2A8MVW0 826 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 UPK1AO00322 258 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 LRP3O75074 770 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TGFBR1P36897 503 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 PRRX1P54821 245 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 FZD2Q14332 565 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 EXOSC6Q5RKV6 272 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 NINJ1Q92982 152 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 JSRP1Q96MG2 331 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MSRAQ9UJ68 235 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ZFP30Q9Y2G7 519 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TRBV4-1A0A0J9YWV2 114 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF850A8MQ14 1090 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SERPINE3A8MV23 424 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SIRPB1O00241 398 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GLSO94925 669 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 IGHV2-70P01814 119 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 CTSAP10619 480 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 VIPR2P41587 438 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GALR1P47211 349 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 HTR5AP47898 357 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 BCDIN3DQ7Z5W3 292 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 LRRC25Q8N386 305 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 RHOVQ96L33 236 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 NIPSNAP1Q9BPW8 284 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 RTP3Q9BQQ7 232 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 G6PC3Q9BUM1 346 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 LHX3Q9UBR4 397 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GAGE10A6NGK3 116 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 HIDE1A8MVS5 230 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 MT-ND6P03923 174 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 KLKB1P03952 638 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SLC6A9P48067 706 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SELENOPP49908 381 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 RPS20P60866 119 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ELAVL3Q14576 367 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ELOBQ15370 118 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 DCAF10Q5QP82 559 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 OR13C9Q8NGT0 318 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 FAM3DQ96BQ1 224 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 STARD4Q96DR4 205 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 MS4A6EQ96DS6 147 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SDSLQ96GA7 329 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 KIR3DX1Q9H7L2 352 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 HRASLS2Q9NWW9 162 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 FTSJ1Q9UET6 329 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 INSL6Q9Y581 213 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 FLVCR1Q9Y5Y0 555 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 LAMB1P07942 1786 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TRAV39A0A0B4J263 110 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 PRRT4C9JH25 899 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 PYCARD-AS1I3L0S3 204 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 FOXE1O00358 373 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 CYB5R3P00387 301 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GYPBP06028 91 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GSTP1P09211 210 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 LIMS3P0CW19 117 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 LIMS4P0CW20 117 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 CXCL2P19875 107 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 CD200P41217 278 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TNFSF10P50591 281 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TP53I3Q53FA7 332 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 PHF19Q5T6S3 580 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 NIT1Q86X76 327 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ZMYND19Q96E35 227 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SLC35E1Q96K37 410 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 GPR174Q9BXC1 333 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 OR52D1Q9H346 318 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ENY2Q9NPA8 101 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ANTXRLA6NF34 631 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TLCD2A6NGC4 264 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SOX1O00570 391 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TGM5O43548 720 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 NME2P1O60361 137 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 NUDT3O95989 172 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 HSPB1P04792 205 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 CXCL3P19876 107 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 PLP1P60201 277 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 SRSF5Q13243 272 aaKnown RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 DOC2BQ14184 412 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 HERPUD1Q15011 391 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF776Q68DI1 518 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-227ENST00000640648 TGIF2LYQ8IUE0 185 aa7.53□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF740Q8NDX6 193 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms