RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 NPIPA2E9PIF3 369 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 NPIPA3F8WFD2 350 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 LDLRAD4O15165 306 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 PLPP2O43688 288 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 SCAF4O95104 1147 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 IGHG1P01857 330 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 KRT8P05787 483 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 PGA4P0DJD7 388 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 PGA3P0DJD8 388 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 CALRP27797 417 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 CSNK2A1P68400 391 aaPredicted RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 SIRPAP78324 504 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 GLO1Q04760 184 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 ODF4Q2M2E3 257 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 DNM1P34Q6PK57 102 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 PLXDC2Q6UX71 529 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 SNX29P2Q8IUI4 249 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 MDS2Q8NDY4 140 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 OTOSQ8NHW6 89 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 SMIM19Q96E16 107 aa11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 MRPL48Q96GC5 212 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF385AQ96PM9 386 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 PPIL3Q9H2H8 161 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-244ENST00000637625 TRABD2BA6NFA1 517 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 GJE1A6NN92 205 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 NME2P1O60361 137 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 KHDRBS3O75525 346 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SP1P08047 785 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 ALOX5APP20292 161 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 FKBP2P26885 142 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 CDAP32320 146 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 MAGEB1P43366 347 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SRYQ05066 204 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 INAQ16352 499 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF684Q5T5D7 378 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 LIPNQ5VXI9 398 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SLC25A25Q6KCM7 469 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 CORO6Q6QEF8 472 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 FDCSPQ8NFU4 85 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SLC26A10Q8NG04 563 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 KCNE4Q8WWG9 221 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 ROBO4Q8WZ75 1007 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SLC25A44Q96H78 314 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 PLGRKTQ9HBL7 147 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 B4GALT7Q9UBV7 327 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 RASD1Q9Y272 281 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 SPENQ96T58 3664 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 CACNA1CQ13936 2221 aa11.14□□□□□ -0.63
CACNA1A-244ENST00000637625 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF726A6NNF4 738 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 CTDSP2O14595 271 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 RGS5O15539 181 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF823P16415 610 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 FGF9P31371 208 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 RORCP51449 518 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 PMP22Q01453 160 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 CDC20Q12834 499 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 MFAP5Q13361 173 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 GPR50Q13585 617 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 OR7E24Q6IFN5 339 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 RPL22L1Q6P5R6 122 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 KLHL24Q6TFL4 600 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 CEACAM19Q7Z692 300 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 SLC25A46Q96AG3 418 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 ORAI1Q96D31 301 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 RBP7Q96R05 134 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 NAA11Q9BSU3 229 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 NXF2Q9GZY0 626 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 MMP27Q9H306 513 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 KLK13Q9UKR3 277 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
CACNA1A-244ENST00000637625 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 OGG1O15527 345 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 EIF1BO60739 113 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 UPK3AO75631 287 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 IL1AP01583 271 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 PTGS2P35354 604 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 PCP4P48539 62 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 CLDN15P56746 228 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 CARD18P57730 90 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 H3F3AP84243 136 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 NHLH1Q02575 133 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 MADCAM1Q13477 382 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF846Q147U1 533 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 C3AR1Q16581 482 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 ACSM3Q53FZ2 586 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 SLC18B1Q6NT16 456 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 C16orf87Q6PH81 154 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 TRILQ7L0X0 811 aa11.12□□□□□ -0.63
CACNA1A-244ENST00000637625 GLMPQ8WWB7 406 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms