RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TNFSF11O14788 317 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 HS3ST1O14792 307 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 STX11O75558 287 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SLC2A5P22732 501 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 AZGP1P25311 298 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PTBP1P26599 531 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GABRA3P34903 492 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 OR2B6P58173 313 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RPS4XP62701 263 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PPP3R1P63098 170 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 OR1Q1Q15612 314 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZNHIT3Q15649 155 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF544Q6NX49 715 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM91Q6ZNR0 172 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RRM2BQ7LG56 351 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 LHFPL3Q86UP9 236 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RDH10Q8IZV5 341 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZFP41Q8N8Y5 198 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 C17orf47Q8NEP4 570 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 OR2M3Q8NG83 312 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 OR10D3Q8NH80 312 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PFN4Q8NHR9 129 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM239Q8WW34 195 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SPRYD4Q8WW59 207 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 S100PBPQ96BU1 408 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 VSTM2LQ96N03 204 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ATF6BQ99941 703 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF426Q9BUY5 554 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 MRI1Q9BV20 369 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TEX12Q9BXU0 123 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TPK1Q9H3S4 243 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 MOV10Q9HCE1 1003 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 Q9N2J8 555 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SDHAF3Q9NRP4 125 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 C20orf141Q9NUB4 165 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ELOVL5Q9NYP7 299 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GSTK1Q9Y2Q3 226 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ANK3Q12955 4377 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 WNK1Q9H4A3 2382 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TENM1Q9UKZ4 2725 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 A8MV72 311 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PTP4A3O75365 173 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 NKX2-2O95096 273 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GOSR1O95249 250 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 IGHV3-9P01782 118 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 HLA-DPB1P04440 258 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CRHP06850 196 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CFL1P23528 166 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 DDOSTP39656 456 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CCR4P51679 360 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 B3GALT5-AS1P59052 145 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 IFITM2Q01629 132 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SCN1BQ07699 218 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FHL1Q13642 323 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RPL13AP3Q6NVV1 102 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF613Q6PF04 617 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SMARCD3Q6STE5 483 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 METAP1DQ6UB28 335 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FAM131AQ6UXB0 335 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 IL17RELQ6ZVW7 336 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ABHD3Q8WU67 409 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SMAP2Q8WU79 429 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ST6GAL2Q96JF0 529 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 NPAS1Q99742 590 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 LMF2Q9BU23 707 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 BEX2Q9BXY8 128 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SLCO5A1Q9H2Y9 848 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RNF122Q9H9V4 155 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CACYBPQ9HB71 228 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FANCFQ9NPI8 374 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TIGARQ9NQ88 270 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CMC2Q9NRP2 79 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 IL20RAQ9UHF4 553 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 SIGLEC7Q9Y286 467 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RNF115Q9Y4L5 304 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 IGHV3-15A0A0B4J1V0 119 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 A0A0B4J293 547 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 A0A0B4J2E0 115 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 A0A1B0GX12 115 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GXYLT2A0PJZ3 443 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FABP12A6NFH5 140 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GTPBP1O00178 669 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RAB27BO00194 218 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PLA2G10O15496 165 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 TSPAN2O60636 221 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 RAMP1O60894 148 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 LYZL6O75951 148 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FCGR2AP12318 317 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 FUT1P19526 365 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PNLIPRP2P54317 469 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 CAV3P56539 151 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 GPR68Q15743 365 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF362Q5T0B9 420 aaPredicted RBP4.23□□□□□ -1.73
LINC00550-201ENST00000629293 ATAD3CQ5T2N8 411 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 EEF1A1P5Q5VTE0 462 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 HBMQ6B0K9 141 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 PLBD1Q6P4A8 553 aa4.23□□□□□ -1.73
LINC00550-201ENST00000629293 MEPCEQ7L2J0 689 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms