RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DOK5Q9P104 306 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 SLC31A1O15431 190 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 HOXA5P20719 270 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 CDX1P47902 265 aaPredicted RBP13.6□□□□□ -0.23
PMS1-221ENST00000624204 SURF2Q15527 256 aaPredicted RBP13.6□□□□□ -0.23
PMS1-221ENST00000624204 EEF1A1P5Q5VTE0 462 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 CLEC18BQ6UXF7 455 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 HIST2H3AQ71DI3 136 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 NAXEQ8NCW5 288 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 OR9K2Q8NGE7 335 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 OR4K15Q8NH41 348 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 LCN9Q8WX39 176 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 AQP10Q96PS8 301 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 CCDC163A0A0D9SF12 145 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 BTBD17A6NE02 478 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 ARGFXA6NJG6 315 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 HOXC4P09017 264 aaPredicted RBP13.6□□□□□ -0.23
PMS1-221ENST00000624204 GDI1P31150 447 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 SLC6A9P48067 706 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 EGR3Q06889 387 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
PMS1-221ENST00000624204 TMEM128Q5BJH2 165 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 APCDD1LQ8NCL9 501 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 RAB11FIP5Q9BXF6 653 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 PLA2G2EQ9NZK7 142 aa13.6□□□□□ -0.23
PMS1-221ENST00000624204 MRPS2Q9Y399 296 aaKnown RBP13.6□□□□□ -0.23
PMS1-221ENST00000624204 A0A087X0M5 115 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 A0A1B0GX30 115 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 DBX1A6NMT0 343 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 SLC31A2O15432 143 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 ZNF84P51523 738 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 SLC25A1P53007 311 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 CLDN6P56747 220 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 RAP1AP62834 184 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 SLC17A1Q14916 467 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 MESTQ5EB52 335 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 FAHD2BQ6P2I3 314 aaPredicted RBP13.59□□□□□ -0.23
PMS1-221ENST00000624204 LINC00114Q6XXX2 140 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 FAHD2AQ96GK7 314 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 OR5B2Q96R09 309 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 LSM5Q9Y4Y9 91 aaKnown RBP13.59□□□□□ -0.23
PMS1-221ENST00000624204 HRKO00198 91 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 EFEMP2O95967 443 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 HPGDP15428 266 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
PMS1-221ENST00000624204 GKN2Q86XP6 184 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 C17orf78Q8N4C9 275 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 SERINC2Q96SA4 455 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
PMS1-221ENST00000624204 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
PMS1-221ENST00000624204 RCL1Q9Y2P8 373 aaKnown RBP13.59□□□□□ -0.23
PMS1-221ENST00000624204 A0A0A6YYH2 397 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 A6NJ64 397 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 ZNF727A8MUV8 499 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 TERTO14746 1132 aaKnown RBP13.58□□□□□ -0.23
PMS1-221ENST00000624204 PET100P0DJ07 73 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 BIKQ13323 160 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 COX15Q7KZN9 410 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 EXD3Q8N9H8 876 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 OR2I1PQ8NGU4 316 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 OTOSQ8NHW6 89 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 LRIT1Q9P2V4 623 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 FBXL17Q9UF56 701 aa13.58□□□□□ -0.23
PMS1-221ENST00000624204 A0A1W2PQ45 241 aaPredicted RBP13.58□□□□□ -0.24
PMS1-221ENST00000624204 A0A1W2PQY0 241 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 RAB27BO00194 218 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 PMELP40967 661 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 CAMLGP49069 296 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 TAS2R31P59538 309 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 RPL18Q07020 188 aaKnown RBP13.58□□□□□ -0.24
PMS1-221ENST00000624204 PRICKLE4Q2TBC4 344 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 ZNF260Q3ZCT1 412 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 ADAMTSL4Q6UY14 1074 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 TMEM184AQ6ZMB5 413 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 DGAT2L6Q6ZPD8 337 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 BEND4Q6ZU67 534 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 OR4C3Q8NH37 302 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 THRSPQ92748 146 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 LPAR4Q99677 370 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 GPR61Q9BZJ8 451 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 RP1P56715 2156 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 KIF26BQ2KJY2 2108 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 WIPF3A6NGB9 483 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 K7EPK0 472 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.24
PMS1-221ENST00000624204 P2RY2P41231 377 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 PSG6Q00889 435 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 TOMM20Q15388 145 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 ANKRD55Q3KP44 614 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 ZNF101Q8IZC7 436 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 OR8B4Q96RC9 309 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 PARPBPQ9NWS1 579 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 FLVCR1Q9Y5Y0 555 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms