RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 MSL2Q9HCI7 577 aa10.54□□□□□ -0.72
LINC00963-217ENST00000624009 ENOPH1Q9UHY7 261 aa10.54□□□□□ -0.72
LINC00963-217ENST00000624009 WIPI2Q9Y4P8 454 aa10.54□□□□□ -0.72
LINC00963-217ENST00000624009 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ZNF593O00488 134 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 MSMBP08118 114 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 FCGR1AP12314 374 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ESRRGP62508 458 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 GRB2P62993 217 aaKnown RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 GK2Q14410 553 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 GINS1Q14691 196 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 HLXQ14774 488 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ATP6AP1Q15904 470 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 SLC35D3Q5M8T2 416 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 OTPQ5XKR4 325 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 PGAP1Q75T13 922 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 DCXRQ7Z4W1 244 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 OR2Z1Q8NG97 314 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 OR9Q1Q8NGQ5 310 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 OR51F2Q8NH61 342 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ZNRF4Q8WWF5 429 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 CCL17Q92583 94 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 KCNJ15Q99712 375 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 OSBPL10Q9BXB5 764 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 WDR76Q9H967 626 aa10.53□□□□□ -0.72
LINC00963-217ENST00000624009 TMEFF2Q9UIK5 374 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-217ENST00000624009 PPIAL4EA0A075B759 164 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PPIAL4CA0A0B4J2A2 164 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 TVP23AA6NH52 213 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PRR23D1E9PI22 279 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PPIAL4DF5H284 164 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 IGHV2-5P01817 119 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 LCATP04180 440 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PRR23D2P0DMB1 279 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PPIAL4FP0DN26 164 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 SRD5A1P18405 259 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 GATA3P23771 443 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 TMEM155Q4W5P6 130 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 KLBQ86Z14 1044 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 ATG16L2Q8NAA4 619 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 ZNF511Q8NB15 262 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 OR6K6Q8NGW6 343 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 OR5K1Q8NHB7 308 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 RNF133Q8WVZ7 376 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 SPSB4Q96A44 273 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 SLAMF6Q96DU3 332 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 OR2V2Q96R30 315 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 INTS14Q96SY0 518 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PRRG3Q9BZD7 231 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 ZNF665Q9H7R5 613 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PAPOLBQ9NRJ5 636 aaKnown RBP10.52□□□□□ -0.73
LINC00963-217ENST00000624009 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 TMEM100Q9NV29 134 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PTTG3PQ9NZH4 202 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 MRPL15Q9P015 296 aaKnown RBP10.52□□□□□ -0.73
LINC00963-217ENST00000624009 PPP1R3CQ9UQK1 317 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 NPTNQ9Y639 398 aa10.52□□□□□ -0.73
LINC00963-217ENST00000624009 XRCC2O43543 280 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 IGHV2-70P01814 119 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 GYPBP06028 91 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 SPARCP09486 303 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 FASP25445 335 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 GSTT1P30711 240 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 DDOSTP39656 456 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 SLC6A9P48067 706 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 CRISP1P54107 249 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 CCNIQ14094 377 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 ASRGL1Q7L266 308 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 TIGD4Q8IY51 512 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 HS3ST5Q8IZT8 346 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 MUC20Q8N307 709 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-217ENST00000624009 SPICQ8N5J4 248 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 IQCF1Q8N6M8 205 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 OR52H1Q8NGJ2 320 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 PLEKHA8Q96JA3 519 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 GABARAPL1Q9H0R8 117 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 GCM1Q9NP62 436 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 TREM2Q9NZC2 230 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 KIF17Q9P2E2 1029 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 POLR3KQ9Y2Y1 108 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-217ENST00000624009 AP4S1Q9Y587 144 aa10.51□□□□□ -0.73
LINC00963-217ENST00000624009 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
LINC00963-217ENST00000624009 KIAA1324LA8MWY0 1029 aaPredicted RBP10.5□□□□□ -0.73
LINC00963-217ENST00000624009 FAM157AC9JC47 383 aa10.5□□□□□ -0.73
LINC00963-217ENST00000624009 J3QLI3 93 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms