RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LCN2P80188 198 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 MALLQ13021 153 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 CRMP1Q14194 572 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 TMEM155Q4W5P6 130 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 DCAF12L2Q5VW00 463 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 ADGRG5Q8IZF4 528 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 KLHL36Q8N4N3 616 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 BHLHE23Q8NDY6 225 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 OR2T33Q8NG76 320 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 OR10G2Q8NGC3 310 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 OR10AD1Q8NGE0 317 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 GIPC3Q8TF64 312 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 SPTSSAQ969W0 71 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
LIG1-215ENST00000597901 MEGF10Q96KG7 1140 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 FEVQ99581 238 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 NIPSNAP1Q9BPW8 284 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 C7orf69Q9H7B7 122 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 PATZ1Q9HBE1 687 aaKnown RBP12.69□□□□□ -0.38
LIG1-215ENST00000597901 ARMC1Q9NVT9 282 aa12.69□□□□□ -0.38
LIG1-215ENST00000597901 FBN3Q75N90 2809 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 AQP12BA6NM10 295 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 F5H5P2 479 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 M0R135 149 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 FOXH1O75593 365 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 CST1P01037 141 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 GYPBP06028 91 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 GATA3P23771 443 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 SLC6A9P48067 706 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 PRSS12P56730 875 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 BTG1P62324 171 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 GK3PQ14409 553 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 PCK2Q16822 640 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 TEX30Q5JUR7 227 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 TRPM8Q7Z2W7 1104 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 DCXRQ7Z4W1 244 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 AQP12AQ8IXF9 295 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 SPICQ8N5J4 248 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 ZNF420Q8TAQ5 688 aaPredicted RBP12.68□□□□□ -0.38
LIG1-215ENST00000597901 CANT1Q8WVQ1 401 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
LIG1-215ENST00000597901 DDX28Q9NUL7 540 aaKnown RBP12.68□□□□□ -0.38
LIG1-215ENST00000597901 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 IGHV3-64DA0A0J9YX35 117 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 VENTXO95231 258 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 IFNGP01579 166 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 SPARCP09486 303 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 CLUP10909 449 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 PSKH1P11801 424 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 SPI1P17947 270 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 OTX1P32242 354 aaPredicted RBP12.67□□□□□ -0.38
LIG1-215ENST00000597901 MDH2P40926 338 aaKnown RBP12.67□□□□□ -0.38
LIG1-215ENST00000597901 PMELP40967 661 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 ENTPD1P49961 510 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 MMP16P51512 607 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
LIG1-215ENST00000597901 MMP26Q9NRE1 261 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 OPN4Q9UHM6 478 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
LIG1-215ENST00000597901 DHRS12A0PJE2 317 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 C5orf63A6NC05 138 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 GNGT2O14610 69 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 GYG2O15488 501 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 ZNF205O95201 554 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 CYB5R3P00387 301 aaPredicted RBP12.66□□□□□ -0.38
LIG1-215ENST00000597901 WNT2P09544 360 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 ADRA2CP18825 462 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 PRKXP51817 358 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 BLVRAP53004 296 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 ZNF92Q03936 586 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 TAF13Q15543 124 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 DRAM2Q6UX65 266 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 C1QL2Q7Z5L3 287 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 MOGAT3Q86VF5 341 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 NANPQ8TBE9 248 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 BCAS4Q8TDM0 211 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 SLAMF6Q96DU3 332 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 KCNJ15Q99712 375 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 CMC2Q9NRP2 79 aa12.66□□□□□ -0.38
LIG1-215ENST00000597901 PDP1Q9P0J1 537 aaPredicted RBP12.66□□□□□ -0.38
LIG1-215ENST00000597901 POLR3KQ9Y2Y1 108 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms